Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VNDARKQINVTVSYDSTYRKMAFPMGDVPQHTGVCTDVVIRAYRQQQIDLQKLVHQDMKKAWVSYPKIWGLKTTDTNIDHRRVPNLETFFKRHGKSLSLTDLSSFKAGDIVTWRLPRNLPHIGIVSDKKNKEGIPLIIHNIGQGTQEEDILFKYKMIGHYRY |
1 | 6b8cA | 0.17 | 0.12 | 3.86 | 1.57 | SPARKS-K | | GAAIVAEAYK-------YIGTPYVWGGKDPSGFDCSGFTRYVYLQVTG----------------------RDIGGWTVP----------QESAGTKISV---SQAKAGDLLFWGSPGGTYHVAIALGGGQ------YIHAPGESVKVGSV-QWFAPDFAVSM |
2 | 2k1gA | 0.20 | 0.13 | 4.15 | 1.08 | FFAS-3D | | ----------------------------------------------NVDVKSRIMD-QYADWKGVRYRLGGSTKK-GIDCSGFV-QRTFREQFGLELPRSSRSNLRTGDLVLFRAGSTGRHVGIYI------GNNQFVHASTSSGVIISSMNEPRYNEARR- |
3 | 4fdyA | 0.15 | 0.10 | 3.54 | 1.46 | HHpred | | ---DDETVQ-VIDEALKYEGFPYVFGGASPTTSFDSGLIQWVYDKAGISLPRV------------------------------A-QDQY--DATQEIS----EEAQAGDLIFFHSTYYVTHVAIYLEG----N--RFYHAG-DPIGYGDLSSRWHLIGARRV |
4 | 6b8cA | 0.26 | 0.17 | 5.33 | 1.13 | MUSTER | | VAEAYKYIG--TPYVWGGKD---PSGD-------CSGFTRYVYLQVTRDI-----------------------------GGWTVPQESA----GTKISV---SQAKAGDLLFWGSPGGTYHVAIALG----GG--QYIHQPGESVKVGS-VQWFAPDFAVSM |
5 | 2hbwA | 0.18 | 0.12 | 4.02 | 1.09 | CNFpred | | IAFTQKAMQQSNYYL--------WGGTVGP-NYDCSGLMQAAFVSVGIWLPR---------------------------------DAYQQEAFTQAIT---IDELAPGDLVFFGTPVKATHVGLYLG------DGCYIHSSGDGIGIDILSEYQQLRGAGRV |
6 | 2hbwA | 0.16 | 0.12 | 3.88 | 1.54 | HHsearch-2 | | ESEIKKLLPGAIAFTQKA-QQSYLGGTVG--PNYCSGL-QAAFVSVGIWLPRDA------------------------------YQQE---AFTQAITI---DELAPGDLVFFGTPVKATHVGLYLGD------GCYIHSSQGGIGIDILSESYQLRGAGRV |
7 | 2k1gA | 0.20 | 0.14 | 4.53 | 1.20 | Neff-PPAS | | KSRIMDQYAD-------WKGVRYRLGGSTKKGIDCSGFVQRTFREQGLELPRSTYEQQE---------------------------------MGKSVSRS---NLRTGDLVLFRAGSTGRHVGIYIGN------NQFVHASTSGVIISSMNEPYRYNEARRV |
8 | 2hbwA | 0.17 | 0.12 | 4.04 | 2.09 | HHsearch | | ESEIKKLLPGAIAFTQKA-QQSYLGGTVG--PNYCSGL-QAAFVSVGIWLPR----D--------------------------AYQQE---AFTQAITI---DELAPGDLVFFGTPVKATHVGLYLGD------GCYIHSSQGGIGIDILSESYQLRGAGR- |
9 | 4fdyA2 | 0.17 | 0.12 | 4.04 | 0.98 | PROSPECTOR2 | | FDDETVQV---IDEALKYEGFPYVFGGASPTTSFDSGLIQWVYDKAGISLPRVAQD---------------------------------QYDATQEISE----EAQAGDLIFFHAGTYVTHVAIYLEGN------RFYHAGD-PIGYGDLSSRYHLIGARRV |
10 | 2xivA | 0.14 | 0.09 | 3.19 | 1.07 | SAM | | -VYGRQASEYVIRRG-SQIGVPYSWGGGNAAVGFCSGLVLYSFAGVGIKLP------------------------------------GSQYNLGRKIPS---SQ-RRGDVIFYGPNG-SQHVTIYLGN------GQ-LEAPDVKVRVAPVRTAG-TPYVVRY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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