>PF06869 (254 residues) EARKLWEYTRNNFSTHTYCNLCGKVLGHINRCNICANAPVATFIRIGGFSQIRELVDSHL NEILQIREELKSGRNVDHVLGSPFFSRGWANESKHHLHLSTLLSIDGVHIPGNNNKLWPV SLLLCDLPIGLMQKSTHVILEGIVECSDTPSTALWNALIPMFMTDIEHHIGRVKNITFSC RITTISADQPAKRAFFGFRHHSAKLSCFFCLAPETYYKHEGPNRKLSRPGHLTIQDSING RNGFTEKKSIIVRH |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | EARKLWEYTRNNFSTHTYCNLCGKVLGHINRCNICANAPVATFIRIGGFSQIRELVDSHLNEILQIREELKSGRNVDHVLGSPFFSRGWANESKHHLHLSTLLSIDGVHIPGNNNKLWPVSLLLCDLPIGLMQKSTHVILEGIVECSDTPSTALWNALIPMFMTDIEHHIGRVKNITFSCRITTISADQPAKRAFFGFRHHSAKLSCFFCLAPETYYKHEGPNRKLSRPGHLTIQDSINGRNGFTEKKSIIVRH | |||||||||||||||||||
1 | 4wwxB | 0.12 | 0.11 | 3.88 | 0.77 | SPARKS-K | NAEKVLLPGYHPFEWQP----------PLKNVSSRTDVGIIDLASSKRFRYDSALVSALMDMEEDILEGMRSQD--------------LDDYLNGPFTVVVKESCDGMGSEKVPEKAVRFSFTVMRITEPKPNSELCCKPLCLMLA-DESDHETLTAILSPLIAEREAMKSEMGPRTFKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDTTRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRD | |||||||||||||
2 | 6b40A | 0.13 | 0.12 | 4.22 | 0.73 | FFAS-3D | PPKQLDAIEKTLMPGTA-RYSLEPDSVTMDFHEYVPDFPCPNTKGFPYAHAVAKTLEELEDEIVNGLKKLGRDPNDP----------------TLVIHTICKDGADGMGDVSVPDKALRFSFCVLRCSVMHKDTEVTIVLECIGDENDDGTVAVCVGPIECQRLLMKDKIMDGTQRAHYLTFFNSMVDEKWDRAHGGLAGAGSKYLCTLCEAVRDEALEKAGSYKITRTLKKIEVTASKMKYESQEKDTFGVK- | |||||||||||||
3 | 4wwxB | 0.12 | 0.10 | 3.58 | 0.35 | HHpred | NAEKVLLPGYHPFEWQPPL-------K--NVSSRTDVGISVDEYPVDTYDALVSALMDME---------------------EDILEGMRSQDLNGPFTVVVKESCDGMGDPEKAFSFTVMRITIEH-------GSQNV----KVFEEPKPNSETLTILSPLIAERMLEMGGI--PRTFKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDTTRLEASQNLVFHSITRSHAENLQRYEVRSNPYHESVEEL--- | |||||||||||||
4 | 4u0oB | 0.08 | 0.07 | 2.95 | 0.77 | MUSTER | TVQRLVRQYGIHICEEGRCPNRGECYGQTRACAFCQVEKGHAPAAVDP-EEPTKIAAAVATLGLRY-----VARDDLPDQGAGQFVATMAAIRQRCPGTEIEVLSPDFRMDRGRLSQRDCI-------AQIVAAQPACYNHNL-ETVRRLQGPVRGATYESSLRVLATVKELNPDIPTKSGLMLGLGE---EAEIIETLKDLRRVGCDRLTLGQYLPPSLSHLPVVKYWTPEEFNTLGN-ELGFSHVRSGPLVR | |||||||||||||
5 | 6cijA | 0.12 | 0.07 | 2.48 | 0.96 | CNFpred | -------------------------------------------------SALVSALMDMEEDILEGMRSQDLDDYLN-----------------GPFTVVVKESCDGMGDVS-PEKAVRFSFTVMRITIVKVFE-LCCKPLCLMLADE--DHETLTAILSPLIAEREAMKSELTPRTFKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDTTR---------------------------------------- | |||||||||||||
6 | 1h7aA | 0.12 | 0.10 | 3.51 | 0.74 | HHsearch-2 | LALECASKRMYPDISVPVSMGCRSFLSVWKELDGLNLP-RIALDSEQKFVLFNERMDLC-FEALMCRISSLKG------VKATVAPILYQEGALKNGRSSVSLGYIGIHELNRDTERTGFAFSLYSTPAEYRFCKLDTEKYGSVKDVTKGWSFHVTPFEKISREPYHATGG----HISYVELPDMKNNLKGLEAVWGSTHEMEGFVCSICGETDMNTIRRTYLGNNERG------------------------- | |||||||||||||
7 | 5hamA | 0.09 | 0.08 | 3.00 | 0.99 | Neff-PPAS | ------TALTEEMLKDYTANKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMG-------YGHWTVLVAKYD-------KKDNQIILTFNDSLGNSINYDGQKLPKLIDKTLGNLPNKPIIIDEQTKQQTDQSACGVFTVDNGIKIAKGQAILSTEESKGEKGLRLREHHAQILTDAMFKQDAQWIRQQ----------- | |||||||||||||
8 | 1dvbA2 | 0.26 | 0.04 | 1.33 | 0.48 | HHsearch | ---RVFLR---EQATKWRCRNCGYVHEGTELCPACAHP-KAHFELLGNW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 3osqA | 0.03 | 0.03 | 1.61 | 0.69 | SP3 | ALDKELKAKGKSALMF----------------------NLQEPYFTWPLIAADGGYAFKYENHLSHNVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKG-------VSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYG------KLTLKFICTTGKLPVPWPTLVTTLVQCFSRYPDHMKQHDFFKSA | |||||||||||||
10 | 5uvgA | 0.04 | 0.04 | 1.93 | 0.82 | PROSPECTOR2 | GLPDSLARVNNLFNTQARAKEIGQRIRNGAARPQIKIYIDSPHPDEAFDHEVSAFFPADKRAATKLKEQLHGYFEYI------LYDVGVYGCLNSYPIMDVAYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPQEDSAIRCGQLDLLQDWLARKSTSSPEELVAFDVVCFDNCSSDDKLEQQHSLFTHYRDPCRWAIGTLLDTNDVCTAFPTSKSSGQKGRKELLKGNGRRIEEGLCPD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |