Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MRPAKSTDSVFVRTPVEAWVAPSPPDDKVAESSYLMFRAMYAVFTQDETGLPLPAMVLCRLIKASLKKDKKLYAELACKTADIGGKHAHVQLIISVLRAVYDDHYDYWSRLRVVLCYTVVFAVRNYLDDHESAAFVLGAIAHYLALYRRLWFARMGGMPRSLRRQFPVRWALAGLTYFLKS |
1 | 6h1nA | 0.19 | 0.15 | 4.99 | 1.62 | SPARKS-K | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGIQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGAD-PSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGEEGSRRLAETIADYLGGEKQDWLVENGGWEGFCRFFHNA------------- |
2 | 6h1nA | 0.17 | 0.13 | 4.38 | 1.60 | FFAS-3D | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGIQQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGADPSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGEEGSRRLAETIADYLGGEKQDWLVENGGW-EGFCRFF--------------- |
3 | 6h1nA | 0.20 | 0.16 | 5.13 | 2.47 | HHpred | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGIQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGA-DPSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGE-EGSRRLATIADYLGGEKQDWLVENGGWE-GFCRFFHNA------------ |
4 | 6h1nA | 0.19 | 0.15 | 4.99 | 1.61 | MUSTER | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGIQQPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGAD-PSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGEEGSRRLAETIADYLGGEKQDWLVENGG-WEGFCRFFHNA------------ |
5 | 6h1nA | 0.18 | 0.15 | 4.84 | 0.99 | CNFpred | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGQQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDT-CGADPSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGEEGSRRLAETIADYLGGEKQDWLVENGGWEGFCRFFHNA------------- |
6 | 6h1nA | 0.20 | 0.16 | 5.13 | 1.55 | HHsearch-2 | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGIQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGA-DPSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGE-EGSRRLATIADYLGGEKQDWLVENGGWE-GFCRFFHNA------------ |
7 | 6h1nA | 0.19 | 0.15 | 4.98 | 1.61 | Neff-PPAS | | ---------------------PLSMSCWLREQTLLLAEDYISFCSGIQQPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGAD-PSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGEEGSRRLAETIADYLGGEKQDWLVENGGW-EGFCRFFHNA------------ |
8 | 6h1nA | 0.20 | 0.16 | 5.13 | 2.44 | HHsearch | | --------------------GPLSMSCWLREQTLLLAEDYISFCSGIQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGA-DPSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGE-EGSRRLATIADYLGGEKQDWLVENGGWE-GFCRFFHNA------------ |
9 | 6h1nA | 0.20 | 0.16 | 5.14 | 1.29 | PROSPECTOR2 | | --------------------GPLSMSCWLREQTLLLAEDISFCSGIQQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGAD-PSKCLQSVMRELVGDGKMNWGRVVSIFTFTGVLASELLSRGEEGSRRLAETIADYLGGEKQDWLVENGGW-EGFCRFFH------------NA |
10 | 1lxlA | 0.13 | 0.08 | 2.86 | 1.67 | SAM | | -------------------------------------------------PMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGT--AYQSFEQVVNELFRDG-VNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAWMATYLNDHLEPWIQENGGWD-TFVELY--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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