Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | RLMRLLPDMRSGCETRRIAISQGDQLLGVLVLEVLESCPYTTTVRVSQEHCLSWLPVPKMEVRVYHDARMAEVVRAENARRFRGIYHYPNAQMHQPDEKNQLNLFLGEWLGHCLACGHE |
1 | 5vglA | 0.07 | 0.07 | 2.71 | 0.93 | SPARKS-K | | NLHKVMPSLSVVGCVRYVKGIHPIEEEFWAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVEGSRFDWSFQCK-----------YIEGMTESAFTEILQHWATEIGQKIEEVCS- |
2 | 3kjpA1 | 0.10 | 0.09 | 3.43 | 0.69 | FFAS-3D | | -----YTPLNQLKGGTIVNVYLSKGTDYCSVVTIVDQTNVKLTCLL-FSGNYEALPIIRLKIQVYKKETQGASLTFEGTLGAPIIPRTSSKYFNFTTEDHKMVEALRVWASTHMSPS-- |
3 | 2wyhA2 | 0.13 | 0.08 | 2.92 | 0.25 | HHpred | | -------DCGDIGNEYISRQPNHDQDQGTIKLNIISNTAQVAELEIQQTFPISAELTLTTLIRMEKNNPRLQFTTRFDNHRLRVL---------------------------------- |
4 | 4n0gC | 0.11 | 0.10 | 3.61 | 0.97 | MUSTER | | KPQAYQRFVKSKGSVRDVTLVSGFPAD-FSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKVVASPVVVESYVVD-----------VPEGTSEEDTIFFVDNIIRYNLTSLAKL--K |
5 | 4rehA | 0.12 | 0.09 | 3.25 | 0.81 | CNFpred | | -------------SVVIWNYSID-GNAMIAKEEIVAIDDKSVTFKVVEGHLFEEFKSIVFSVHVDTKNLVTWSIDYEKLN---------------VKDPTSYLDFLLSVTRDIEAHHLP |
6 | 5jnpA | 0.15 | 0.03 | 1.13 | 0.39 | HHsearch-2 | | --------------------------------------------------------------------------------------------ALTFDALAETSEFARKWVPFVKKYNIE |
7 | 4xrwA2 | 0.08 | 0.08 | 3.26 | 1.05 | Neff-PPAS | | LWAERLPHVSSVGLQVLRMDTRAKDGSVHTTESVRVCFPHH-RIVYKQTTLPALMTLHTGRWDFAEEPGTTASSEHTVVLNTANIAKVLGAGAGVAEAREFVRTALSTNSRATLGFAKD |
8 | 4yqxA | 0.17 | 0.13 | 4.13 | 0.58 | HHsearch | | HLEQLLMDLQELL-S---RM----------------------------ENYRNLKLPRMLTFKFYLPKQARHVLDLTQSKSIRKLKGSDNTFECFDDESATVVDFLRRWIAFCQSIIS- |
9 | 4n0gC | 0.10 | 0.09 | 3.41 | 0.95 | SP3 | | KPQAYQRFVKGKGSVRDVTLVSGFPAD-FSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKVVASPVVVESYVVDVPEGTSE-------EDTIFFVDNIIRYNLTSLAKLTKKMM-- |
10 | 4n0gC | 0.11 | 0.10 | 3.62 | 0.60 | PROSPECTOR2 | | KPQAYQRFVRGKGSVRDVTLVSGFPAD-FSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKVVASPVVVESYVVD-----------VPEGTSEEDTIFFVDNIIRYNLTSLAKLKMM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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