Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | AAQKAGISVGQYKAAMRMLPAQFTDVATQLAGGQSPWLILLQQGGQVKDSFGGMIPMFRGLAGAITLPMVGATSLAVATGALAYAWYQGNSTLSDFNKTLVLSGNQAGLTADRMLVLSRAGQAAGLTFNQTSESLSALVKAGVSGEAQIASISQSVARFSSASGVEVDKVAEAFGKLTTDPTSGLTAMARQFHNVSAEQIAYV |
1 | 5xg2A | 0.08 | 0.07 | 2.95 | 1.30 | FFAS-3D | | AIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEK-------RAEISELERRLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEI-EVAKRRINELDTLIERERGELAKLRGRIERLERKRDK-- |
2 | 2yfaA | 0.12 | 0.11 | 4.04 | 1.01 | Neff-PPAS | | IANGDDTAAANTLAKLDAFSKQQAYLATTFKS--PENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAELDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAV-RQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER- |
3 | 4uosA | 0.08 | 0.07 | 2.74 | 0.87 | SPARKS-K | | ---------GDNEEVKKMLEKMIEEIKKMLEKAIKVKEMLEKMIKEIKKMLENGE---DSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKIKKVKEMLEKMIKEIEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG------------ |
4 | 2tmaA | 0.10 | 0.09 | 3.51 | 1.21 | FFAS-3D | | -LELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKL-KEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKA-- |
5 | 4abxA | 0.11 | 0.08 | 3.02 | 0.22 | HHpred | | -------TQRERARQIDLLAFQVQEISESPDPGE--EEGLNTELHTIAQAAAG---GV----ELLSDGDL------NA--------------AGLIGEAVRALNAGAKY-DETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEALDRVEAALSKLKNKYGPTLEDVVEFGAQAAEE-LAGLEEDERDAG---------- |
6 | 2yfaA | 0.12 | 0.12 | 4.18 | 0.89 | MUSTER | | IANGDDTAAANTLAKLDAFSKQQAYLATTFPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMAADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAV-RQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER- |
7 | 3dyjA | 0.10 | 0.10 | 3.78 | 0.76 | CNFpred | | SQEKLAQAAQSSVATITRLADVVKLGAASLGADPETQVVLINAVKDVAKALGD-DPAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATTEHIRQELAVF-STPEDFIRMTKGITMATAKAVAAGCRQEDVIATANLSRRAIADMLRACKEAAFHP-DVRLRALHYGRECANGYLELLDHVLLTLQKPNPDLKQQL |
8 | 4yxxA3 | 0.13 | 0.04 | 1.54 | 0.37 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------TVEEAVKRALKLKKLGVSLEQALKILEVAAKLGT-T---VEEAVKRALKLKTKLGVSLEQALKILKVAAELGT--------------------- |
9 | 5nnvA | 0.06 | 0.06 | 2.73 | 0.98 | Neff-PPAS | | EELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQ |
10 | 5yylC | 0.15 | 0.03 | 1.00 | 0.37 | HHsearch | | -----------------DVVSQINSLVSSIVSGANVSAVLLAQTVNILQILIDA-NVF------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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