>PF06779 (358 residues) LTLGMGLGRFLYTPMLPVMMAEGSFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLR PFLLASALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAA LFSGVGIGIALGNEYVLAGLHFDLSSQTLWQGAGALSGMMLIALTLLMPSKKHAITPMPL AKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCF GWLWAAKRWGALPCLTANLLVQAICVLLTLASDSPLLLIISSLGFGGTFMGTTSLVMTIA RQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSTLAGATLCGAAALFIAALIS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LTLGMGLGRFLYTPMLPVMMAEGSFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLASALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFDLSSQTLWQGAGALSGMMLIALTLLMPSKKHAITPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAICVLLTLASDSPLLLIISSLGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSTLAGATLCGAAALFIAALIS | |||||||||||||||||||
1 | 4zowA | 0.13 | 0.13 | 4.39 | 3.68 | SPARKS-K | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIG--RRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFVCIKITALMANVALIAPLLGPLVGAAWI-HVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEGRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMV | |||||||||||||
2 | 1pw4A | 0.14 | 0.13 | 4.60 | 2.84 | FFAS-3D | --AAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN--PRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAGTAAGFTGLFGYLGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVIL- | |||||||||||||
3 | 1pw4A | 0.14 | 0.14 | 4.68 | 4.65 | HHpred | -YAAYYLVRKNFALAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDR--SNPRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWERGGIVSVWNCAHNVGGGIPPLLFLLG-MAWNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPNDMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVGNRGATVFFMTLVTIATIVYWMNPNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAGTAAGFTGLFGYLGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILL | |||||||||||||
4 | 4zowA | 0.13 | 0.13 | 4.46 | 2.25 | MUSTER | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDR--IGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFECIKITALMANVALIAPLLGPLVGAAWIH-VLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGKNGRFVAGALALGFVSLPLLAWIAQSPIIIITQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAAHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMV | |||||||||||||
5 | 4zp0A | 0.13 | 0.13 | 4.46 | 2.29 | CNFpred | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDR--IGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFECIKITALMANVALIAPLLGPLVGAAWIH-VLPWEGMFVLFAALAAISFFGLQRAMPETATRIGE-RDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMV | |||||||||||||
6 | 4zowA | 0.13 | 0.13 | 4.46 | 1.14 | HHsearch-2 | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDR--IGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFVCIKITALMANVALIAPLLGPLVGAAW-IHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAASHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGG-NGLFNLFNLVNGILWLSLM | |||||||||||||
7 | 4zowA | 0.11 | 0.11 | 4.01 | 2.60 | Neff-PPAS | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIG--RRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFECIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGESSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAAHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMV | |||||||||||||
8 | 4zowA | 0.13 | 0.13 | 4.46 | 1.82 | HHsearch | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDR--IGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFVCIKITALMANVALIAPLLGPLVGAAW-IHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAASHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGG-NGLFNLFNLVNGILWLSL- | |||||||||||||
9 | 4zowA | 0.13 | 0.13 | 4.39 | 2.76 | PROSPECTOR2 | YEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDR--IGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFVCIKITALMANVALIAPLLGPLVGAAW-IHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRNGRFVAGALALGFVSLPLLAWIAQSPIIIITQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAASSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMK | |||||||||||||
10 | 1pw4A | 0.14 | 0.14 | 4.66 | 3.65 | SAM | -----YLVRKNFALAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDR--SNPRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWERGGIVSVWNCAHNVGGGIPPLLFLLG-MAWNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP-FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVGNRGATVFFMTLVTIATIVYWMNPNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAGTAAGFTGLFGYLGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAV--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |