Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RDNIQINQRQCILLLDIFYSAYKSIADEMKDNLKFEERNLKWKVLEMPLRELHRIFKEGEAYIKESLESKDWWVKAITLYQNTDCVELHISNLLSCIPVVIEAIESAAQLSGWEQDEMQKKKRVYSNKYHKEWIDPELFQWKFAKQYLVTQDFCNRIDNVWKEDRWILKNKIQEKENSRFRKQERKLADLLLRNLDSSKSLKDKLLPSSILLG |
1 | 5cwoA | 0.18 | 0.16 | 5.20 | 0.83 | SPARKS-K | | ------------PELEEWIRRAKEVAKEVEKVARAEEEG--NPDLRDSAKELRRAVEEAIEEAKKQGNPEEWVARAAKVAAEVIKVAIQAEKALELVRAVIEAIEEAVKQGN----PELVEWVARAAKVAAEVIKVAIQAEKEG-----NRDLFRAALELVRAVIEAIEEAVKQGNPERVARLAKKAAELIKRAIRAEKEGNRDERREALERV |
2 | 1fewA | 0.11 | 0.08 | 3.03 | 0.92 | FFAS-3D | | ------SLSSEALMRRAVSLVTDSTSTFLSQTT---------YALIEAITEYTKAVYTLTSLYRQYTSLLGVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEATGADQASITARNHIQLVKLQVE----------------EVHQLSRKAETKLAEAQIEELKQKTQEEG---EERAESEQEAYLRE------------------- |
3 | 2msvA | 0.11 | 0.07 | 2.37 | 0.32 | HHpred | | CEEMKYCKKQCRRLGHRVLGLIKPLEMLQD----QGKRSVP-SELTTAMNRFKAALEEANGEIEKFSN-RSNICRFLTASQDKILFKDVLSDVWKELSLLLQ-VEQRMPVSPISQGASWAQEDQQDADEDRRAF------------------------------------------------------------------------------- |
4 | 4tqlA | 0.14 | 0.14 | 4.65 | 0.70 | MUSTER | | KQMVQELEKARDRMEKLYKEMVELIQKAIELMRKFQE--VK-QEVEKAIEEMKKLYDEAKKKIEQMIQDKQKMEELLKRAKEKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEELEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQ--LIEKAKQVAEELIKKILQLIE-KAKEIAEKVLKG |
5 | 4gmxC | 0.06 | 0.05 | 2.26 | 0.71 | CNFpred | | -----------EGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFY--KACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPLDSETVKIIANIIKTNV--------AVCTSMGADFYQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEIL-------KLVETYISKA |
6 | 2pffB | 0.14 | 0.14 | 4.78 | 0.68 | HHsearch-2 | | GNDIHLAAKLLQENDTTLVKTKELIKNYITARIMAKRPFALFRAVFEELRDLYQTFSTLSELIRTTLDAEKVFTQGLNILENTPDKDYLLSIPISCGVIQLAHYVVTAKLLGFTPGELRSYLVTAVAIETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTPPSILEDSLENNEGVPSPLLTQEQVQ-DYV-NKTN-SH-LPGKQVEISLVNG |
7 | 5cwpA | 0.13 | 0.12 | 4.10 | 0.78 | Neff-PPAS | | ------GDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEV-NEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE------- |
8 | 4btfA1 | 0.11 | 0.07 | 2.35 | 0.59 | HHsearch | | CEKMKYCRKQCQRLGNRVHGLLQPLQRLQAQGK----KN-LPDDITAALGRFDEVLKEANQQIEKF--------------ILFHEVNEKLRDVWEELLLLLQVPAWQQEDAEEDGNENMKVI--------L----------------------------------MQLQISVEEINK------------TL-KQCS----------------- |
9 | 2f8zF | 0.12 | 0.11 | 3.83 | 0.70 | SP3 | | KPG---VGLDAINDANLLEACIYRLLKLYCREQPYYLN------LIELFLQSSYQTEIGQTLDLLTAPQGN-----VDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQDPSVTGIQDNKCWLVTPEQYQILKENYAEKVARVKALYEELDLPAVFQYEEDSYSHIMALIEQYAAP----LPPAVFLG |
10 | 5cwmA | 0.08 | 0.08 | 2.97 | 0.91 | PROSPECTOR2 | | ------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAERAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVAELVVRVAELLLRIAKESGSEEALE-RALRVAEEAARLAKRVLELAEKQVKRVAELLERIARESGSEEAKERAERVREEARELQERV-----KELRER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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