Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IFGTIIGSFLNVCIHRIPKEESIITPPSYCPKCGKKIKWYDNIPIISYLILKGKCRNCKEKISIQYPLVELLTGFLTTGIVWKY |
1 | 6cc4A3 | 0.19 | 0.17 | 5.38 | 1.08 | MUSTER | | -VGLIGLIVVKVLAPGF-YSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAG--------LSLSIGLAACLNASLLYWQLRKQ |
2 | 4ladB | 0.14 | 0.10 | 3.25 | 1.41 | SP3 | | ---------------------------DDCAICWDSMQAARKLPLRSWLEQDTSCPTCRMGSADERQRMLVQRKDELLQQARKR |
3 | 5ed7A2 | 0.04 | 0.04 | 1.92 | 0.90 | SPARKS-K | | NGLFRDALAAGTTAEQLLMFDLLPPKD---VPVGSD-VQADSTALLRFIESQRLAVPGGVISPEHVAYLGAFLSVLRMSAATHT |
4 | 5fywW | 0.14 | 0.13 | 4.46 | 0.49 | FFAS-3D | | -----YPHAIDAIKWKVHQVVQRLKDGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEQDKLNRLMDQIQPIIDSLK- |
5 | 2l7xA | 0.13 | 0.07 | 2.49 | 0.33 | HHpred | | ----------------------RELKPQTCTICETTPVAIDAEMHDL-NCSYNICPYCASRLTSDGLARH-------------- |
6 | 5ezmA3 | 0.10 | 0.10 | 3.51 | 0.97 | MUSTER | | IGMAIVAACGLLASPVVATLNANHIPNSF-----RAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLG |
7 | 5xtcl | 0.06 | 0.05 | 2.06 | 0.79 | CNFpred | | AITTLFAAVCALTQNDIK-----------------KIVAFSTSSQLGLMMVTIGINQPH--LAFLHICTHAFFKAMLFMCSGSI |
8 | 2fiyA | 0.16 | 0.15 | 5.17 | 0.60 | HHsearch-2 | | FLGAALQVAWSHWLLGLEEGAVETESRTLCPACGSPPMAGMIRQ-TGWHYVRIKCSHCEESKHLAYLSLEHGSLALDMRLADGY |
9 | 3nxcA2 | 0.04 | 0.04 | 1.95 | 0.76 | Neff-PPAS | | -TTARLRLIVLLLLGFGERNPGLTRILTGHARLQGRINFERIEAQLRQVLREKRMREGGYATDETLLASQILAFCEGMLSRFVR |
10 | 2l7xA | 0.15 | 0.11 | 3.61 | 0.39 | HHsearch | | ----------------------RELKPQTCTICETTPVAIDAE-MHDLNCSYNICPYCASRLTSDGLARHVTELYLNLRIPWV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|