Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | AVDVELVLAVDVSLSMSPGELEIQRHGYAAALTHQSVIDAISDGLHGRIAVTFFEWAGDFSQRVLVPWTVIASAEDAEKIAQMLTASPSQSARRTSISGAINFASDLFAESPYKGVRRVLDVSGDGPNNQGPSVTEARDALVAEGITINGLPLMTNEGYASSFDTSDLDNYYTNCVIGGPGAFMIPVNEWSQFPEAIRRKLVIELAGA |
1 | 4wfqA | 0.15 | 0.13 | 4.54 | 1.45 | SPARKS-K | | GIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQ--MGIIIMRNG---LAQLVSQVSGNPQDHIDALKSIRK--QEPKGNPSLQNALEMARGLLLPVP-AHCTREVLIVFGSLSTTDPDIHQTIDSLVSEKIRVKVLGLSA--------QVAICKELCKATN-YGDESFYKILLDETHLKELFNEAVTPLPV-- |
2 | 4wfqA | 0.16 | 0.14 | 4.65 | 1.96 | FFAS-3D | | GIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMR---NGLAQLVSQVS--GNPQDHIDALKSIRKQE--PKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSA--------QVAICKELCKATNYGDESFY-KILLDETHLKELFNEAV------- |
3 | 4wfqA | 0.16 | 0.14 | 4.78 | 1.53 | HHpred | | -IIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIM---RNGLAQLVSQVS--GNPQDHIDALKSIR--KQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSAQV---------AICKELCKATNYGDESFYKILLDETHLKELFNEAVT------ |
4 | 1v7pC | 0.16 | 0.15 | 4.94 | 1.62 | MUSTER | | --LIDVVVVCDESNSIYP-------WDAVKNFL-EKFVQGLDIGPTK-TQVGLIQYAN--NPRVVFNLNTYKT---KEEMIVATSQTSQYGGDLTNTFGAIQYARKYAAASGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLG-YLNRNALDTKNLIKEIKAIASIPTERYFFNVSDEAALLEKAGTLGEQIFSI- |
5 | 4wfqA | 0.14 | 0.12 | 4.27 | 1.37 | CNFpred | | --IRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNG---LAQLVSQVSG--NPQDHIDALKSIRKQ--EPKGNPSLQNALEMARGLLLPVPA-HCTREVLIVFGSLSTTDGDIHQTIDSLVSEKIRVKVLGLSA--------QVAICKELCKATNYG-DESFYKILLDETHLKELFNEAVTPLPV-- |
6 | 6fpyA | 0.11 | 0.10 | 3.48 | 0.91 | HHsearch-2 | | NMNKNVVFVIDISGSMRG-----QKVKQTKEALL-KILGDMQPG--DYFDL--VLFGTR--VQSWKGSLVQASEANLQAAQDFVRGF--SLDEATNLNGGLLRGIEILNQVQLSNHASILIMLTDGDPTEGVDRSQILKNAIRGRFPLYNLGFGHNV------D-----FNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVAKPL |
7 | 1v7pC | 0.15 | 0.13 | 4.55 | 1.59 | Neff-PPAS | | --LIDVVVVCDESNSI-------YPWDAVKNFLEKFVQGL--DIGPTKTQVGLIQYANNPRVVFNLN-----TYKTKEEMIVATSQTSQYGGDLTNTFGAIQYARKYAYSAGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLG-YLNRNALDTKNLIKEIKAIASIPTERYFFNVSDEAALLEKAG-TLGEQIFSI |
8 | 4hqfA | 0.14 | 0.12 | 4.13 | 1.35 | HHsearch | | NDEVDLYLLMDGSGSIRRH----NWVNHAVPLAM-KLIQQLNLNDAIHLYA--SVFSNN--AREIIRLHSDANKEKALIIIKSLLST-NLPYGKTSLTDALLQVRKHLNDRIRENANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGI------NVAFNR-----FLVGCHPSNLYADSAWENVKN-VIGPFMKAVCV- |
9 | 1qc5a | 0.13 | 0.12 | 4.15 | 1.58 | PROSPECTOR2 | | STQLDIVIVLDGSNSIYPW-------DSVTAFLN-DLLERMDIGPKQ-TQVGIVQYGEN--VTHEFNLNKYSSTEEVLVAAKKI---VQRGGRQTMTALGTDTARKEAARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAIL-GSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDEIALVTIV-KTLGERI--- |
10 | 5a8jA | 0.15 | 0.12 | 4.03 | 1.64 | SAM | | -SGIHYVVMIDNSPSMKKE----NKINLALSSAS-RLVQDIIPG--NFISI--YLFSND--IETLYEGE--------SGKQIELKSI--KMGYTTNLHKAITKVLEKFKSS---EIPVKIILLSDGKPTDKRYSRDYESLQVPKNVQLITIGLGEDY-----------NEAIMKILADKGSGVFYHINDPSQLPTTLVE--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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