Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | NNTKIKIKRLCEKIEGFEKEIKNEILQKKNVEKEKIYIIREAINKLEKNLNNEIKKRIEHNRNIQNIFSSEILKVQEKIENVVHDKVYEIENAIKVLNEKINNISSNIENEKVKCIQSLEKKNNNIAKEFATLQSNFQQEKIHNKEKENNICKKLEEIEKKNEAKIDTEKNIRDSKYQEIISYIEEIKREKKGKNENFQNFVLEEIATIKNGLIMESQAREAADDDIVQAVNHYTKALQDSLRLINS |
1 | 4tqlA | 0.10 | 0.09 | 3.40 | 1.36 | SPARKS-K | | ------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--------------------- |
2 | 2tmaA | 0.11 | 0.11 | 3.82 | 1.99 | FFAS-3D | | DAIKKKMQMLKLDKENALDRAEQAAEDRSKQLEDELVSLQKKLKGTEDELDKDAQEKLELAEKKATDAEADVASLNRRIQ-LVEEELDRAQERLATALQKLEEAEKAADESERGMKVI-ESRAQKDEEKMEIQEIQLKEAKHIAEDADRKY-EEVARKLVIIESDLEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEDKYEEEIKVLSDKLKEAETRAEFAERSV-TKLEKSIDDLEDELYAQK- |
3 | 4tqlA | 0.11 | 0.10 | 3.65 | 1.39 | MUSTER | | ------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQG-KQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDELLEKIKKNI-----------DDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--- |
4 | 4tqlA | 0.10 | 0.09 | 3.33 | 1.69 | Neff-PPAS | | ------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDD----------ELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--- |
5 | 2yfaA | 0.09 | 0.08 | 3.12 | 1.27 | PROSPECTOR2 | | GSHMGDIGQLNKDLTDLRIARLQGDDTAAANTLAKLDAFSKQQAYLATTFKPENVKLLGELGDTISAYKLSLNKMRQ-GYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQ-YQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRD---------AVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQL------ER |
6 | 4uosA | 0.15 | 0.11 | 3.57 | 1.13 | SPARKS-K | | -----------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG--------------------------------------- |
7 | 6irdB | 0.10 | 0.09 | 3.46 | 1.81 | FFAS-3D | | -----RIEDLMAAYLAHLAAQQAELNSLKAAHAAEHSTMQKLHCTQVDKIVAQYDKEKSTHEKILEKAMKKCLEIKKETEIKIQTLTTDHKSKVKEIVAQHTKEWSEMINTHSA--EEQEIRDLHLSQQCELLRKLLINAHEQQTQ---QLKLSHDRESKEMRAHQAKISMENSKAISQDKSIKAERERRVRELNSSNTKKFLEERKRLAMKQSKEMDQLKKVQLEHLEFLEKQNEQAKEMQQM--- |
8 | 5nnvA | 0.10 | 0.09 | 3.45 | 1.23 | MUSTER | | --AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL-------------- |
9 | 5nnvA | 0.10 | 0.09 | 3.43 | 1.62 | Neff-PPAS | | -----------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRK--EVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ--LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQK |
10 | 4tqlA | 0.12 | 0.11 | 3.98 | 1.27 | PROSPECTOR2 | | YKQMQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGD------KQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDELLEKIKKNIDDLKKIAEDLIKKAEENIKEA-----------KKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLK---G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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