>PF06694 (319 residues) MEEIQKKLATLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQGDAVDR DEETSRIQYLAEIAKFLGITTTVDPEAIQGRGSYEDRMEMLRLIVDLVEASMYADNPEWS VDEQVAKDIQLIDAIAEKQSQIFSEECKLFPADVQIQSIYPLPDISDLEKQLSDQSNRLL SLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTKEIRPWTHMMEVP QLHGFGPAANRLLEAYKMLWKFLGNLKNLRDSHAAVAAGSSETVAGEPSSVTRIISECET ALTLLNRDLAILSASIARE |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MEEIQKKLATLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQGDAVDRDEETSRIQYLAEIAKFLGITTTVDPEAIQGRGSYEDRMEMLRLIVDLVEASMYADNPEWSVDEQVAKDIQLIDAIAEKQSQIFSEECKLFPADVQIQSIYPLPDISDLEKQLSDQSNRLLSLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTKEIRPWTHMMEVPQLHGFGPAANRLLEAYKMLWKFLGNLKNLRDSHAAVAAGSSETVAGEPSSVTRIISECETALTLLNRDLAILSASIARE | |||||||||||||||||||
1 | 1cunA | 0.06 | 0.04 | 1.68 | 1.27 | FFAS-3D | VHQFFRDMD----------------------DEESWI--------------------------KEKKLLV-------------------SSEDYGRDLTGVQNLRKKHKR----------LEAELAAHEPAIQSVLDTGKKLSDDN---------------TIGKEEIQQRLAQFVDHWKELKQLAAARGQR-------------LEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENSA-- | |||||||||||||
2 | 6ek4A | 0.11 | 0.10 | 3.76 | 1.16 | Neff-PPAS | IEIIQEKTLRIS-LYSRDLDEAARASVPQLQTVLRQLPPQDYFLTLTEIDTELEDPELDDTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVSNVVILERLESSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDVIRQYNLADMFKDYIPNISDLDKLANPKKELIKQAIKQGVEIAKKILGNISKGLK------YIELADARAKLDERINQINKDCDDLKIQLK--GVEQRIAGIEDVHQIDKERTTLLLQAAKLEQAWNIFAKQLQNTIDGK-IDQQDLTKIIHKQLDFLDDLALQYHSMLLS- | |||||||||||||
3 | 3ay5A | 0.10 | 0.08 | 3.14 | 0.84 | SPARKS-K | --------------------------LASPLEQLRHLAEELRL---LLPRVRVGEAT-EEFNREMFWRRLNEAAVTVSREATTLTIVFSQLPSPQETQKFCEQVHAAIKAFIAYLLPKDQRKLVRGATLDIVDGMAQLMEVLSVQQMPQIPRDN----------KAAALLMLTKNVDFVKDAHEEMEQAVEESD-PQDLYWSEDDQELIIPCLALVRASKACLKKIRMLVAENGKKDQVAQLDDIVDISDEISPSVDDLALSIINSAKLVSVLKKALEITKASH-VTPSWIPLLINAIDHCMNRIKELTQSELEL---- | |||||||||||||
4 | 5nl6A | 0.11 | 0.08 | 2.84 | 1.25 | FFAS-3D | FLDFLRATEGM-------VHDYE----QRAQALKENI--------------------------EAAINKMNG-------------------VEPSDEYHQVKEQINETKNYRK------GDKRAFIKEQGDLATLFGQINSKLRGM------KRPVYVAPEGLDPKSLEGYIANISEAERALRSKLNT--------------AMRNCLIALRKAFADPANATDAKINEYRTFVTDETSE---APLEEQVATLKAKLEELKQVEAQLPPIEEAEKACEDANIEDNEYTDVSFDDLQFNYEQTVSMFEKKIVYIEAQI--- | |||||||||||||
5 | 3edvA | 0.12 | 0.10 | 3.62 | 0.36 | HHpred | ---------------------------REVDDLEQWIAERE-VVAGRFREFA------RDTNGQERVDTVNHLADELINSGHSDAATIAEWKDGLN--EAWADLLELIDTRTQILAASYEL-HKFYHDAKEIFGRIQDKHKKLP---EELGRDQNT--------VETLQRMHTTFEHDIQALGTQVRQLQEDAAYAGDEAWKSLCESRRVRLVDTGDKF-RFFSMVR-DLMLWMED-VIRQAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYA----SEEIKEKLLQLTEKRKEMIDKWEDR | |||||||||||||
6 | 1u4qA | 0.13 | 0.12 | 4.13 | 0.85 | MUSTER | QQNFNTGIKDFD---LSEVEALLASEDYG-LASVNNLLKKH----QLLEAD---------SAHEDRLKDLNSQADSLMTSSAFDTSQVK--DKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRK----KHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEE-IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ-KMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH----VENITAKMKGLKGKVSDLEKAAAQR | |||||||||||||
7 | 4iggA | 0.12 | 0.10 | 3.53 | 0.92 | CNFpred | IDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVF-------REHANKLIEVANLACSIS-NNEEGVKLVRMSASQLEALCQVINAALALAAK--QSKLAQENMDLFKEQWEKQVRVLTDAVDDIT-------------------SIDDFLAVSENHILEDVNKCVIALQE----------KDVDGLDRTAGAIRGRAARVIHVVTSEMDNYE----------PGVYTEKVLEATKLLSTVMPRFTEQVEAAVEALSSDPAQPMD--------ENEFIDASRLVYDGIRDIRKAVLMI | |||||||||||||
8 | 1vt4I | 0.13 | 0.12 | 4.06 | 0.41 | HHsearch-2 | MLQKLLYQIDPNWTSRSDNIKLRIHSIQAERRLLAWNAFNLSCKILRFKQVDFLSLDHSMTLTPDEVKSL---LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW----------DNWKHVNCDKLTTIIESSLNVLEPRLSVFPPSAHIKSKYKIPSI-YLELKVKLENEALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNFRMVFLDFLEQKIRHDSTA-WNA----SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLKYDLLRIALM----AEDEAIFEEAHK-QVQRG | |||||||||||||
9 | 5j1iA | 0.09 | 0.09 | 3.36 | 1.15 | Neff-PPAS | LEACETRTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALSPPTLRSELELTLGKLEQVRSLSAIYLEKLKTISGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEAQQPTFDARGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQL-GRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLR--QEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQESVIQEYVDLRTHYSELTTLTSQYIKFISET | |||||||||||||
10 | 6gaoA1 | 0.11 | 0.05 | 1.90 | 0.49 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------HMEEIKKQVQVNVDDIRAANIKLDGLGRQIADISN-SISTIESRLGEMDNRLVGISSQVTQLSN-SVSQNTQS-----ISSLGDRINAVEPRVDSLDTVTSRTSTLEADVGSLRTELAARVTTEVTRLDGLINSGQNSIGELSTRLSNVETSMVT- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |