>PF06674 (316 residues) SFSHKDWELACDNTLTCRAAGYSTEEGAGGSVLLTRQAGENTVVSGEVVLADAMDEDPKP VAELSLWIDDTALGALQKADNDEWRLTEAQTQAVIRAVKGNGTVEFRGGEEPFELSDNGA FATLLKMDDAQGRTGTPGALVRKGDKPESSVMVAVAAPVIQQVKVIQAQPRPLTAQELSS VKPQLIDSLTDDDSCDNLQPSDDQPEEGAEPITLTPVDKSHVLISALCWRGAYNEGYGYW LMDKRLQQKPELITDSGSDYHDGVISLAQKGRGIGDCWSTAAWVWDGKDFQQSSEATTGM CRAIRAGGPWQLPTLV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SFSHKDWELACDNTLTCRAAGYSTEEGAGGSVLLTRQAGENTVVSGEVVLADAMDEDPKPVAELSLWIDDTALGALQKADNDEWRLTEAQTQAVIRAVKGNGTVEFRGGEEPFELSDNGAFATLLKMDDAQGRTGTPGALVRKGDKPESSVMVAVAAPVIQQVKVIQAQPRPLTAQELSSVKPQLIDSLTDDDSCDNLQPSDDQPEEGAEPITLTPVDKSHVLISALCWRGAYNEGYGYWLMDKRLQQKPELITDSGSDYHDGVISLAQKGRGIGDCWSTAAWVWDGKDFQQSSEATTGMCRAIRAGGPWQLPTLV | |||||||||||||||||||
1 | 3dtdC | 0.11 | 0.05 | 1.70 | 1.04 | SPARKS-K | TETYGLWSINCGIQEVCFMHRQEVNDQNRVVVAMSVVLNADGVVSGNLTVPFGILVSKP----VRLQVDEGKAVGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAALFVQLNGFSNALNRLIALQKEGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 3dtdC | 0.12 | 0.05 | 1.69 | 1.29 | FFAS-3D | TETYGLWSINCEGKKVCFMHRQEVNDQNRVVVAMSVVLNADGVVSGNLTVPFGILVSKP----VRLQVDEGKAVGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAPPLNDLFVQLNGFSNALNRLIALQKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 3dtdC | 0.13 | 0.05 | 1.76 | 1.03 | HHpred | TETYGLWSINCGIQKVCFMHRQEVNDQVVVAMSVVLNAD--GVVSGNLTVPFGIL----VSKPVRLQVDEGKAVETGIRTAVPIVFDK----NYVAALRAGKHLKLAMGPNDLFVQLNGFSNALNRLIALQKEGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 3dtdA | 0.12 | 0.05 | 1.68 | 1.23 | CNFpred | TETYGLWSINCGIQKVCFMHRQEVNNRVVVAMSVVLNA--DGVVSGNLTVPF----GILVSKPVRLQVDEGKAVIETGI-PAGCIVPIVFDKNYVAALRAGKHLKLAMTLNDLFVQLNGFSNALNRLIALQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 3dtdC | 0.13 | 0.05 | 1.86 | 3.06 | HHsearch-2 | TETYGLWSINCGIQKVCFMHRQEVNDQVVVAMSVVLNAD--GVVSGNLTVPFGIL----VSKPVRLQVDEGKAVETGIRTPAGCIVPIVFDKNYVAALRAGKHLKLAMGENDLFVQLNGFSNALNRLIALQKEGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3dtdC | 0.11 | 0.05 | 1.70 | 1.06 | Neff-PPAS | TETYGLWSINCGIQKVCFMHRQEVNDQNRVVVAMSVVLNADGVVSGNLTVPFGILVSK----PVRLQVDEVIETGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIADLFVQLNGFSNALNRLIALQKEGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3dtdC | 0.13 | 0.05 | 1.86 | 3.89 | HHsearch | TETYGLWSINCGIQKVCFMHRQEVNDQVVVAMSVVLNAD--GVVSGNLTVPFGIL----VSKPVRLQVDEGKAVETGIRTPAGCIVPIVFDKNYVAALRAGKHLKLAMGENDLFVQLNGFSNALNRLIALQKEGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 3dtdC | 0.11 | 0.05 | 1.70 | 1.55 | SP3 | TETYGLWSINCGIQEVCFMHRQEVNDQNRVVVAMSVVLNADGVVSGNLTVP----FGILVSKPVRLQVDEGKAVGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAALFVQLNGFSNALNRLIALQKEGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 3dtdA | 0.12 | 0.05 | 1.69 | 1.09 | PROSPECTOR2 | TETYGLWSINCGIQKVCFMHRQEVNDQNRVVVAMSVVLNADGVVSGNLTVPFG----ILVSKPVRLQVDEGKAVGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAALFVQLNGFSNALNRLIALQKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5ak1A | 0.10 | 0.09 | 3.14 | 0.64 | SPARKS-K | ---------------ASPQRGRPLNAARTTFVG-----DNGQPLRGPYTSTEWTAAAPYDQNAVHLYAECF-DPRYPAPGSKAPGYAVNEIDKIVERTRELGVITIGNGANNGNHNAQWARDFWKFYAPRYA--KETHVLVAWGPPYSSSTANPPGAVDEIDVIIRTYAPETPGAAEALKDIRAFNKAVFGNENAVW----------------------TNEAVAFHGYAGLLKAGYPCFTEYAGGAWGTYELERLGVSW---LTFQYIPPTGVSDDVTKP------EYFSALVENSGLSWTPDYGNWPAARGVYG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |