Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | FKVTVYSPYVILNKTGLELSIRSKGFLQQAKSAAGQPLIDLADQEHKAVPLMFSFGNDDQRNRASLKIGDSDWSKPQSFDAIGSTTEAVLQASGRNAEIHVGITVEAGEGKYKMTKVVTLAPRYIIKNRLGEDINIREPSSSSLMSLKTGQLQPLHFLQKSQVKQLCLCFPGVNNQWTSPFNISDLGTTHIKIAKAGQRQRLVRVDVLMEDATIFLNLSIEKKNWPYSMRNESDTEFTFYQANPNIDDDGVEDRSGWRPIRYRLPPRSIMPYAWDFPAAK |
1 | 3jroA | 0.07 | 0.06 | 2.51 | 0.84 | SPARKS-K | | --HNELIHDAVLDYYGKRLATCSSDKTKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK---------------VLIWKEENGRWSQIAVHAVHS----ASVNSVQWAPPLLLVASSDGKVSVVEFKSPIIIDAHAIGVNSASWATTKESRKFVTGGAD--------------NLVKIWKYNSDAQTYVLESTLGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPKTLLKEEKFPDVASWSLSGNVLALSWKENLEG |
2 | 4ncdA | 0.10 | 0.05 | 2.00 | 0.71 | FFAS-3D | | ---------------------------------------------------------------FMIY------PISKDLKNGNSELVRVYSKSKEIQYIKIYTKKIINPGTTEEYEV--------DIPNWDGGLVVT----PQKVILPAGASK----------------------------------SIRLTQFKIPKKEEVYRVYFEAVKPAALIRSLPSEQNISLIIYNNGNVRAGVKD-IYFCKSSNIDDNCVKKAYNKNIYPEKSFDT-------- |
3 | 2i0wA | 0.10 | 0.04 | 1.31 | 0.26 | HHpred | | -------------------------------------------------------------------------------------------------------------------------ATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGDCGGVCTWGKPPNTL--AEYALDQFS--------------NLDFWDISLVDFNIPMTFAPTKPS--------------------------------------------- |
4 | 5xxzA | 0.11 | 0.11 | 3.98 | 0.85 | MUSTER | | LKDNL-DTGLVTNQAQLAV---VHRNQPQSQLTKNQDFFISPNEDGNKDFVAFKGLENNVYNDLTVNVYAKDQTPIWSSQAGAGSTAWYGITARGSKDYQYVVTYRDEHGKEHQKQYTISVPITQGRFDTINGVDHFTPDKTKALGSSGIVREEVFYLAKKNGRKFDVTEGKDGITVSDNIPKNPDGSYTISKRDGVTLSDYYYLVEDRAGNVSFATLRDGKDKAVVNFGLDLPVNFTYLVRDADGKPIENLEYYNNSGNSLILPYGTVELLTYDTNAAK |
5 | 3vu4A | 0.09 | 0.08 | 3.01 | 1.23 | CNFpred | | TDYEFNQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLH---RTNYVAFVTG--VKEVVHIWDDKKQDVSRIKVD--APVKDLFLSR---EFIVVSVISVFKFG-DIRFGGVCEFSNGLLVYSNELGQIHITKLQS-KGVLIKAHPIKMVRLNR--KSDMVATCSQ---------------DGTIIRVFKTEDGVLVREFRRGLDADVVDMKWSTD---GSKLAVVSDKWTLHVFEIFNDQDNKMKYFQSEWSLCNFKLSVVRGCKIAWISESSL |
6 | 5no8A2 | 0.10 | 0.03 | 0.93 | 0.48 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------------------------------VLVSCN----KYVFEKGEKARVECRSLEPLEACTAKMNGEGNLCFVEVPMEQAGEVRFDFYYNGNKQTHADCLVIS----------------------------------------------------------------------- |
7 | 4es8A | 0.11 | 0.10 | 3.63 | 0.98 | Neff-PPAS | | DDLMNFKGTWEVSADGSSGRFFSKGATDSYVFHLIPAKDVKKP----------GWREHNEVKDSYIKIDKQSIAARYKTSTTAYSVAFKVNTKSLIKDHDYKITFEQGQIASGITVDYRIGSAFNKTTDDSFKISD-ESKYASNVKIEGEEQ----GFKQREQGDKTISFRTLKEGPMSLVLLSKVEFKNLKIIDVTNPSQLDKGVAYVGNKNVQLTLKSDDGR-----TNFEGDEISLFNSRGELLQTVTVTKDQQNPISITLSNKEKLKVSIKQKQSK |
8 | 4neiA3 | 0.07 | 0.01 | 0.59 | 0.40 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------NV-----KSVKHVSENGKDVVDLKDGSNVVVALSNANSEQVHKVNAGEEAIEWKGFSSVVVR---------------------------------------------------------------------------------------------- |
9 | 5oljA | 0.05 | 0.05 | 2.21 | 0.76 | SP3 | | MSWFLA--FVRSDESAVPEYRMPMYEDKLYPEDYTYKYPKAGEKNSTVSLHLYNVADRSLPIDADGYIPRIAFTDNMTLNRLQNDFKMYYVHPKSLVPKLILQDMNKRYVDSDWIQALKFTAFAYVSEKDGFAIYLYDNKGVMHRRITSGNWDVTKLYGVDASGTVFYQSAEESPIRRAVYAIDAKG----RKTKLSLNVGTNDALFSGNYAYYINTYSSAATPTVVSVFRSKGAKELRTLEDNVALRERLKAYRYNPKEFTIIKIDF-------DPSRH |
10 | 2vxrA | 0.10 | 0.10 | 3.67 | 0.91 | PROSPECTOR2 | | ATMNVGSDFKLNNSENSNITAHQSKFVVYDSMTPKYNNNDIQTYLQNEYTIISCIKNDVNAKSKSIFFEYSIKDNI--SDYINKWFSITITNDRLGNANDIDFKLINCTDTTKFVWIKDFDTQYYLFNQGMQNIYIKYFSKASMGETAPRTNFNINYQNLYLGLRFIIKKASNSRNINNDNIVREGDYIYLNIDNISDESYRVYVLVNSKEIQTQLFLAPINDDPTLQIKKYYEKTFGIGKFVKDYWDTENINKLRLGCNWQFIPVDE----GWTE---L |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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