Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FVNQVFSNMPVAAKVAMVNLNLKQYLKDLERDETFCSKFTQIIRMFINRDITTHDVCTILDAADGIKLTHGQIDYFCNQVYYNGHILHILQTFIDYQHLTDDEINDLSQFLVKEIDNAIMI |
1 | 5cwjA | 0.09 | 0.08 | 3.17 | 0.74 | SPARKS-K | | SLRQAIEDVAQLAKLEEAIRVILRIAKESG-SEEALRQAIRAVAEIAKEAQDIRVILRIAKESG----SEEALRQAIRAVAEIEEAIRVIRQIAEESG--SEEARRQAERAEEEIRRRAQ- |
2 | 2iu5A2 | 0.13 | 0.11 | 3.71 | 0.89 | FFAS-3D | | ----------LLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLL------DKVIFDQEKKSDYHWSDLEKSFICRYNA--AAICAITRESIIRGNSLEKLYSQIVNLLLAQIK----- |
3 | 3mmiA2 | 0.11 | 0.09 | 3.30 | 0.30 | HHpred | | LFNDLITKLNW-KYGYEVDERLVSWFEPRIDVRPNLIQIIQAVKILQLKISNLNEFKLLFDFW--YALNPAQIQAILLKYKPA--------------GVPNEILNYLANVIKRENLSLP-- |
4 | 5icjA | 0.14 | 0.13 | 4.54 | 0.64 | MUSTER | | FKAALFRDV-VEVVEQDVMARMATLVAAS-GAATPADAIRAAVDAWLEV-SGDPEVRQLILLDAPVVLGWAGFRDVAQRYSL-GMTEQLITEAIRAGQLARQPVRPLAQVLIGALDEAAMF |
5 | 2nx4A | 0.08 | 0.07 | 2.93 | 0.59 | CNFpred | | ---------ILRTSYEHISEATDRRIAEALGDATGLDALRILCREVMPINEEQLLEARIAASLWPRAMYDEQMAATNRRTMDNWQMAIFLEQAREEGSVGDIDVTIVVEQLLNMMMGMQIL |
6 | 1vt4I3 | 0.15 | 0.14 | 4.72 | 0.51 | HHsearch-2 | | ---------EYALHRSIVDHYIPKTFDDLILDQYFYSHIPERMTLFRMVFLDFRFLEQKIRHDNGSILNTLQQLKFYYICDNDPKYERLVNAILDEENLICSKYTDLLRIDEAIFEEAHKQ |
7 | 2iu5A2 | 0.12 | 0.11 | 3.82 | 0.64 | Neff-PPAS | | NSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKS------DYHWSDLEKSFICRYNAA--AICAITRESIIRGNSLEKLYSQIVNLLLAQIKIFE-- |
8 | 3h92A | 0.21 | 0.10 | 3.14 | 0.51 | HHsearch | | --------------------------------------------------------------ETKLEEERNHLEELLEKVEEYDEVLEALKLFKDNYELPKSKIRKIRIFLIKE--NILF- |
9 | 2jjzC | 0.10 | 0.09 | 3.36 | 0.66 | SP3 | | AFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNIDLMSLKRMMEKL-GVPKTHLEMKKMISEVTGG-----------VSDTISYRDFVNMMLGKRSAVLKLVMM |
10 | 2iu5A2 | 0.12 | 0.11 | 3.82 | 0.58 | PROSPECTOR2 | | NSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLL------DKVIFDQEKKSDYHWSDLEKSFICRYNA--AAICAITRESIIRGNSLEKLYSQIVNLLLAQIKI--FE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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