Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TVTIDVSKLSATTKRRGGKAPRSSMKMQSMPEPTKSKEGSSPVDTISTTSSQADPDRDQQPINNMTCGVLCSKEAMVMDPVDQNGMVLLMGTNCSDDSVNQIRGFEEESEMEALLSCIDTDMAASVLTGIEQGGHSPQVEDLLDMDWEGFASHLWDQPSQSDLLKTAEPQAMTSSELDELESFVSWLLSDD |
1 | 5jcss | 0.06 | 0.06 | 2.70 | 1.00 | SPARKS-K | | GESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLLQQLAKMLAKKLTVINVSQQTKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENEEKKLLLDKWADFNDSVKKFEAQS |
2 | 4ke2A | 0.06 | 0.06 | 2.70 | 1.18 | Neff-PPAS | | NIDPAARAAAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALINVKAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAFAA |
3 | 1js9C | 0.13 | 0.12 | 4.19 | 0.99 | SPARKS-K | | MSTSGTGKMTRAQRRAAARRNRWTARVQPVIVEPLAAGQGKAIKAIAGYSEASSDAITAKATNAMSITLP--HELSSEKNKELKVGLLWLGLLPSVAGRIKACVAEKQAQAEAAFQVALAVADSSVAAMYTDAFRGATLGDLLNL---QIYLYASEAVPAKAVVVHLEVEHVRPTFDDFFTPVYR------ |
4 | 3j65r2 | 0.07 | 0.06 | 2.63 | 0.51 | FFAS-3D | | IVAKTLATSREKERKRVSILEDKKAKNETQHIASGKDKITEKANGAEENSVDLEETEEEEDDGLIREKTTYDGKPALLFIVRVRG-------------PLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVISLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNVEDIIHEIATMG |
5 | 3kn3B2 | 0.09 | 0.04 | 1.60 | 0.25 | HHpred | | --------------------------------------------------------------------------------------------RATTTSTDNTGLLDVLAAYKKDTWVAVG-TNCDVDVVFVHAPK-VELEYVEKGF----GI-DRTPVFYSIA---VNPKRCEKADYKGAKQFIDWIVSEK |
6 | 4k0mC | 0.09 | 0.08 | 3.04 | 0.93 | MUSTER | | DETVEVAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAAAAAAAAAAAAA------------- |
7 | 1vdkA | 0.05 | 0.02 | 0.76 | 0.48 | CNFpred | | -------------------------------------------------------------------------------------------------------------NVNEVIANRASELGSKYAHPNDHVNRGQSSNDTFPTAMYVAVALALHQ-----------------RLYPAVEGLIRTFTAKA |
8 | 2pffA | 0.20 | 0.19 | 6.19 | 0.59 | HHsearch-2 | | NIQLDFPELKPYKQLDLERVPGSAMESYNGNRPTGWVDSKEPVDDKDEHSGLIEPENPEKKEMIVEEDLEPSKEQFKHQHVDLVAGQIPTGSDDIISQVDPITLFVLVSVVEAFIASGITDPVSEVGNCSGMGGVSA-LR---G----MFKDRFKDEPVQNDILQESFINTACATSVSVDIGVETILSGKA |
9 | 2tmaA | 0.08 | 0.07 | 2.92 | 1.07 | Neff-PPAS | | -AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARK----------LVIIESDLERAEERAELSEGKCAELEEEIKTVTNNL |
10 | 3muqA2 | 0.14 | 0.07 | 2.32 | 0.35 | HHsearch | | -------------------------------------------------------------------------------------EHV---RLATTTSTYHSGLLDYLPQFEKDT-GYKVAGTGKALK-GEN-G---DV-DLVAPKAETFVEKGYGVLPRKLPYQVILV--NPERYPQGAKAFSDWLVNP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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