Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TDSRLRSAVADTFALVVYCFITGMAIEILISGMTFEQSLSSRLLSIPVNILIAWPYGMYRDSFIRFAQRCAGQHFWAKNLADLLAYVSFQSPVYAIILWTVGADFQQIVTAVASNAVVSMVMGVAYGYFLEYCRRLFRV |
1 | 4tkrA | 0.05 | 0.05 | 2.36 | 1.03 | SPARKS-K | | SFSISLGMIPMYVIAIRRGFWAAGFAGLLWGLLHFLTMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAQLFSIVMNGASCLGTVLVSGIIISILLKTSPKLFL |
2 | 4hyjA | 0.10 | 0.09 | 3.47 | 0.97 | FFAS-3D | | ----TVAALVTFVAAIHYTTPLLLVKFPLLLGRLGRPLLTKLVIADVIMIVGGYGLWSYLIGCFAWIAAENKPAPIRDALLKMRLFILIGWAIYPIGYAVTAPGVEIQLVRELIYNFADLTNKVGFGLIAFFAVKT--- |
3 | 2yvxA | 0.10 | 0.06 | 2.42 | 0.28 | HHpred | | LRDWRRVFLKEMGVGLLLGLTLSFLLVGWDGHPLL---LPVVGVSLVLIVFFANLVGAMLPFLLRRLGVDPVSNPLVATLSDVTGLLIYLSVARLL------------------------------------------- |
4 | 5t77A | 0.12 | 0.12 | 4.29 | 0.69 | MUSTER | | KGSISYLQYASRFYLLPYGLFAVSVSTVVLSKISNYHLNDALKTTLFFTIPSMVGLIFLSTPIIRFF-HGAFTSKDTLITSKILIAYTLGLPFYGIYSTISRSNTKTPFIAATIVSLSNIILDIIFGLKYGPIGVALAT |
5 | 3rkoC | 0.10 | 0.09 | 3.43 | 0.91 | CNFpred | | ------GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF-----QTDIKRLIAYTSVSHMGFVLIAIYTG--SQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT |
6 | 1pv6A | 0.09 | 0.09 | 3.52 | 0.55 | HHsearch-2 | | SLKLALELFRQPKLLSLYVSCTYDVFANFFTSFAGEQGTYVTTMGELLNASIMFFAPLIINRIGGKNALLFATSALEVVILKTLHMFEV-PFLLVGCFYITSQEVRFSATIYLFFKQLAMIFMSVAGNMYESIQGAYLV |
7 | 4tkrA | 0.05 | 0.05 | 2.32 | 0.79 | Neff-PPAS | | ------GMIPMYVIAIRRGFWAAGFAGLLWGGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGGWGAQLFSIVMNGASCLGTVLVSGIIISILLKTSPK |
8 | 5aymA1 | 0.12 | 0.06 | 2.02 | 0.51 | HHsearch | | -----------------------------------------------------------------------LRIETQLLLGRLLTRSGDQVPFALL--VIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQV- |
9 | 6mjpG3 | 0.14 | 0.12 | 4.15 | 0.85 | SP3 | | VTVKPEELLTGLSDYVHYLKASEQDSSRYEL---ALWRKVTQPISIAVMMLMALSFIFG---------PLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRKL--------- |
10 | 2asr | 0.08 | 0.08 | 3.08 | 0.71 | PROSPECTOR2 | | KSFVVSNQLREQQGELTSTWDLMLSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFK------SMAPLPEMVATSRNIKYKNYYTALTELIDYLDYGNTGAYFAQPTQG--MQNAMGERFAQYALSSEKLYRI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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