Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ASQCLCCSKFLLQRQNLACFLTNPHCGSIINADGHGEVWTDWNNMSKFFQYGWRCTTNENAYSNRTLMGNWNQERYDLRNIVQPKPLPSQFGHYFETTYDTSYNNKMPLSTHRFKREPHCFPGHQPELDPPRYKCTEKSTYMNSYSK |
1 | 4rmxA2 | 0.10 | 0.08 | 3.05 | 1.03 | SPARKS-K | | ---------LTTISEQYFTAYDEFPGGREFP---TGTVIHCASGKKVVTVGGAFFSKATVTGQTYLQSNALNWASNGYAKAAGTKIVIPGAGGDLVTTIRATYVTNSLYTIDIADPIVT----------PTAENTQIKALNPVTFVT |
2 | 6r24A | 0.04 | 0.04 | 2.08 | 1.26 | Neff-PPAS | | LKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGQHFYKP---PDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTT |
3 | 5foyA1 | 0.16 | 0.14 | 4.52 | 0.99 | SPARKS-K | | NLDFIDSFIPTEGKYIRVMDFYNSPFCIHAPSAPNGDIMTEICSREN-NQYFIFFPTDDG----RVIIANR------------------HNGSVFTSVVSDIYTGSPLQFFREVKRTATYYLAIQPELEPHSHELPSRLYYTNNIEN |
4 | 1qwyA | 0.22 | 0.12 | 3.66 | 0.31 | FFAS-3D | | ------------------------------------------------VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTYVNPATAGDNNDYTAS-------------------- |
5 | 1v7vA1 | 0.09 | 0.07 | 2.63 | 0.24 | HHpred | | ----------PDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTK--FRPAT-FDRPGHYVYLRDDD-----SGDYISWQPVAKSLDEAYQIRHGLSYSKFQCVIKNTQVRTISAFSFVEFSFSHIQSDN------------ |
6 | 1ssnA | 0.09 | 0.08 | 3.12 | 0.80 | MUSTER | | SSSFDKGKYKKGDDAS---YFEPTGPYLMVNVTGVDS---KGNELPHYVEFP---IKPGTTLTKEKIE-YYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK--- |
7 | 1y8qA | 0.16 | 0.04 | 1.35 | 0.53 | CNFpred | | -----CCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANL--------------------------------------------------------------------------------------------------------- |
8 | 2k8pA | 0.16 | 0.13 | 4.31 | 0.53 | HHsearch-2 | | VTDGPCRS--AKPVTELVCSGQCGPARLLPNAIGRGKWWRP-------SGPDFRCIPDRYRAQRVQLLCPGGAPRRKVR-LV-ASCKCKRLTRFHNQSELKDFGTEAAPQKGRKRPRARSAKANQAELENAY--------------- |
9 | 3iykG | 0.05 | 0.04 | 1.97 | 1.21 | Neff-PPAS | | ---------------TLRGYDERVVESTRHKSFHTNDQWVQWMMKDSMDAQPLKVGLDDQSRNVAHSLHNIDSKKADTMSYHVEPIEDTRTMMWNHLVRIETFHAAQEVAYTLKPTYDIVVHAERRDRSQPFRQSRHDPGEIK---- |
10 | 1qwyA1 | 0.27 | 0.11 | 3.34 | 0.45 | HHsearch | | ------------------------------------------------VSYGTYYTIDNGDYH-HTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGS--------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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