Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | CMSLSYQTSWKYLQATYIYPKVFTDRCRDPNSERGMPTVMCSSVCVSLMEPDVEAGVFIGFKHIRGCLDRVLRHGFNQSALRTHRFHQNNHCRTLSRSALFNPARTTDPPALGDVQLCSCYGDRCN |
1 | 1ks6A | 0.19 | 0.14 | 4.60 | 1.06 | SPARKS-K | | -----------QLPRLCKFCDVKATTCSNQDQTSNCITSICEEVCAAVWRRNDE-----NVTLETIC------HDPQKRLYGMLDDSSSEQCV-----------MKEKKDDGGLMFMCSCTGEECN |
2 | 2hlqA | 0.24 | 0.17 | 5.20 | 1.18 | MUSTER | | CAF-------------KDPYQQDLGIGESRISHEN-GTILCSKGCYGLWEK--SKGDIN--LVKQGCWSH---IGDPQE--------HYEECV---------VTTTPPSIQNGTYRFCCCSTDLCN |
3 | 3u73U | 0.19 | 0.11 | 3.58 | 1.20 | CNFpred | | CKGNS------------------THGCSSEE----TFLIDCRNQCLVATGTHEPKNQ---SYMVRGCATAS-------------------MCQHAHLGDAFS---------MCHIDVSCCTKSGCN |
4 | 2hlqA | 0.21 | 0.14 | 4.54 | 1.15 | Neff-PPAS | | ----------------KDPYQQDLGIGESRISHEN-GTILCSSTCYGLWEKSK----GDINLVKQGCWSH----------IGDPQECHYEECVVT---------TTPPSIQNGTYRFCCCSTDLCN |
5 | 6qixA2 | 0.13 | 0.13 | 4.42 | 1.04 | SPARKS-K | | CLWFPLKNIVSHVYDHCHVHKEPDGYEPHSVAPANVHIPKC-GFCFRVKCMKRDKGCFPLKLGKKSCGCAFPRVMKEKIWDDFTATSKEKHMPHWKRDGYLMQLPYSNCKEVGDKCKCCCHGTACV |
6 | 2hlqA | 0.23 | 0.13 | 3.98 | 0.46 | FFAS-3D | | ---------------------------------HENGTILCSKTCYGLWEKSKGD----INLVKQGCWSH----------IGDPQECHYEECVV---------TTTPPSIQNGTYRFCCCSTDLCN |
7 | 3bt1U2 | 0.17 | 0.10 | 3.13 | 0.38 | HHpred | | --------------------GNSTHGCSSE----ETFLIDCRNQCLVATGTHEPK---NQSYMVRGCAT-------------------ASMCQHAHLGDAFSM---------NHIDVSCCTKSGCN |
8 | 3bt1U1 | 0.15 | 0.09 | 2.94 | 0.97 | MUSTER | | ------------------------LRCMQCKTNGDCRVEECADLCRTTIVRLWEEGEEL-ELVEKSCT-------------------HSEKTNR--------TLSYRTGLKITSLTEVVCGLDLCN |
9 | 3bt1U | 0.19 | 0.11 | 3.58 | 1.17 | CNFpred | | CKGNS------------------THGCSSEE----TFLIDCRNQCLVATGTHEPKNQ---SYMVRGCATAS-------------------MCQHAHLGDAFS---------MNHIDVSCCTKSGCN |
10 | 3bt1U | 0.18 | 0.16 | 5.17 | 0.72 | HHsearch-2 | | CTHSEKTN-R-TLSYRTGLKITGLDLCNQGNSGERHQSLQCREQCLDVVTHWIQEGRPKDDRHLRGCGYLPGCPG----SNGFHKCCNTSMCQHAHLGDAFS---------MNHIDVSCCTKSGCN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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