Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDDVF |
1 | 1lqmH | 0.10 | 0.09 | 3.13 | 0.77 | SPARKS-K | | -------------MTNLSDIIEKETGKQLVIQESLMLPEEVEEVIGNKPESDILVHTAYTDENVMLLTSDAPEYKPWALVIQD---SNGENKIK |
2 | 3h82A | 0.12 | 0.11 | 3.78 | 0.47 | FFAS-3D | | --LSEHSMDMKYCDDRITELIPEELYEFYHALDSENMTKSHQNLCTKQVVSGQYRMLAKHGGYVWLEIYNPRNLQPQCIMCVNYVLS------- |
3 | 5tupA1 | 0.09 | 0.06 | 2.43 | 0.25 | HHpred | | ----------------------EGFSPYRCDIALGINLVSLTKVLRAAQNEDILTLKADDPDAVNLMFESAETDRISEYDIKL-MDIDQ----- |
4 | 4rxmA1 | 0.15 | 0.14 | 4.68 | 0.67 | MUSTER | | VVFSLPNLSSPFEV-QLQKVAVETSKKLDGQSSSTKQASDLENAITRGA--KGIIISPNDVNAIAVEEIIKEK--IPAATLDRKVESSKPVPHF |
5 | 1qsmA | 0.09 | 0.06 | 2.47 | 0.56 | CNFpred | | ----------------WQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVEKIIGMINFFNHMTTWDFKDKIYINDLYV-------- |
6 | 2pffA1 | 0.08 | 0.07 | 2.97 | 0.43 | HHsearch-2 | | DAIIPFAAIPEEHIDS-KSEFAHRIMLT---NILRMMGCVKKQKSARGIETRPAQVILPMHGTFGGDGMYSESKLSLETLFNRHSESWNANNII |
7 | 2c4rL2 | 0.11 | 0.10 | 3.45 | 0.79 | Neff-PPAS | | -------------NESLSLSILRLIEEEALKENHAIVPVPIASYLLNEKRSAVNAIETQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYM |
8 | 5lhyA | 0.20 | 0.12 | 3.73 | 0.41 | HHsearch | | ------------------------SV-F-VKNVG----------WATQLTSGAVWVQFNDGSQLVVQAGVS---SISYTSTTRYGENEKPDYI- |
9 | 3mjqA | 0.05 | 0.04 | 2.05 | 0.57 | SP3 | | EDILIINREGRYANTAVPKKLHEELSHILTITGKAEGEKILAELFAGKKESLPLSLEKKEGTKARIWQGKWHNEPCLFAIIKDLS--------- |
10 | 5bq9A1 | 0.07 | 0.06 | 2.67 | 0.40 | PROSPECTOR2 | | VTKIIWVSNNEFVSEEEKSNFFKEVKKKASELGLNFPVELSHFILPKVGVKTEHAEIFKDHNTIFFHKHKLPGVN-----SELTFIPTGTPVIV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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