Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | WCFFLFSFLGWCSEVVFAAVRERRFVNRGFLNGPLCPIYGSGVVAIDFFLRPFGSSLPVQLVGAMLLGSVLEYAAGFLLEKLFHQKWWDYSDTPHNLHGYICLKFSVVWGLAGALIVRYVMPLAHRLFGQIPRQVGWVLLVVLGSLFVADFLVT |
1 | 6ei3A | 0.09 | 0.08 | 3.00 | 1.00 | SPARKS-K | | ALVTPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDPMHI----------------AWQILPYALLTFGEVLVSATGIEFAYSQPPSMKGVVMSFWYLTTTVGNLWV |
2 | 2b6pA | 0.09 | 0.09 | 3.43 | 0.77 | FFAS-3D | | ---ICAEFFASLF-YVFFGLGASLRWAGPLHVLQVALAFGLALATVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYT |
3 | 5tj5A | 0.14 | 0.12 | 4.22 | 0.28 | HHpred | | ----LMGVF-----SMYTGFLYNGTENALFSNMKLSILMGFIHMTYSYFFSLANHDPGLLFMQGLSVCIVYKWAVDWLLNMLINMFLSPGTIDDELYPHQAKVQVFLLLALVCIPWLLLVKPLHFKF-DIMIHQVIHTIEFCLNCVS------- |
4 | 6ei3A2 | 0.13 | 0.12 | 4.26 | 0.89 | MUSTER | | WAFGIPGILMFIATAVFWLGRRYVRVPLPPKVTPFFSLFDQKASTWVLQGREMRMPASQMQALNPLLVMLLIPFNNLVLYPLLRRL-----GWEPT------SLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHIAWQILPYALLTFGEVLVS |
5 | 3rkoB | 0.08 | 0.08 | 3.05 | 1.00 | CNFpred | | HLVGIVGAVTLLLAGFAALVQ-----TDIKRVLAYSTMSQIGYMFLALGVQAW-DAAIFHLMTHAFFKALLFLASGSVILACH--HEQNIFKMGGLRKSIPLVYLCFLVGGAALSAGFFSKDEILAGAMANGHMVAGLVGAFMTSLYTFRMIFI |
6 | 5tj5A | 0.14 | 0.14 | 4.68 | 0.81 | HHsearch-2 | | FLMTLAALSLVLNESMYTGFLYNGTENALFSNMKLSILMGFIHMTYSYFFSLANHDPGLLFMQGLSVCIVYKWAVDWLLNMLINMFLSPGTIDDELYPHQAKVQVFLLLALVCIPWLLLVKPLHFKFIHTIEFCLNHTAALSLAHAQLSSVLWT |
7 | 4tkrA | 0.07 | 0.06 | 2.64 | 0.87 | Neff-PPAS | | SFSISLGMIPMYVIAIRRG-----------------FWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGASCLGTVLVS |
8 | 3jcuL | 0.14 | 0.03 | 1.12 | 0.30 | HHsearch | | ------------------------------------------------------------------------------------TQS-NPNEQNVELN-----RTSLYWGLLLIFVLAVLFSNYFF--N------------------------- |
9 | 4ug4A | 0.11 | 0.09 | 3.26 | 0.84 | SP3 | | WT---------------PDYRKPGERIDWWYHN-----------LGSVTGAGVAEITNQMEYDDEVAFLANQKLYQLSRENVARRKFWDYEDCEHLTPEVGAIPLDEQ----DPHSQRIMLSCDYQNFDVTEENVRRSRRAYFANISYLDEKVG |
10 | 4zowA2 | 0.09 | 0.08 | 3.19 | 0.73 | PROSPECTOR2 | | LALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAY--------------LWMTAGLSIYAFGIGLANAGLVRLTLFASDLFNLFNLVNGILWLSLMVIFLK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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