Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ITSDDNELIDLDPVQPYAYLNNGKLTIEISPNNPNYPGYGDGMSHNTTYVFEEMFNVSNDLWENENQNFPICVQISVPQNSSVKVFAGNYNDDGTATIANPGTQIQFTVEHGQPVSVGFIFDNTCEELGTHSVNMDIQAWAGAC |
1 | 4or1A | 0.15 | 0.12 | 3.98 | 0.72 | SPARKS-K | | -----STEISLEGLHNMGQLFDGTGRIICRERH-------------------TGFHIQMNARQVEGRPGHYIVQGSKDTQSKLWVRLGREGSPQGIVRSGQEEQVIFDVMKPGEYIFSVSGKCLTAVAKTATSTITVV------ |
2 | 3prxB6 | 0.14 | 0.10 | 3.33 | 0.64 | FFAS-3D | | --------------------------------------DGFIADSDIISRSMKVFFIDLQMVKNEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQG----LHDVEIKASVQE- |
3 | 3qbtF | 0.13 | 0.09 | 3.15 | 0.33 | HHpred | | --------MDRMDFLPSLELSRR--EFVFENVK-----FRQ------L--QKEKFQISNNGQV------PCHFSFIPKLND--------SQYC--KPW-LRAEPFEGYLEPNETVDISLDVYVSKDSVGKIEDILVLHLDRGK- |
4 | 5bxgA | 0.10 | 0.10 | 3.56 | 0.82 | MUSTER | | KEEKKDKEVVIKIISDKITINNIEFSYDVLPKVKESLYTHYPAESGKVYID--AADIKNTQKQELNCSDLLTIEANYNDGYKYSSQTIVEDETTGFTYDNIS-----SIDPLETKGVRFIIDC--DEVKTSDKPVILSFTFDGN |
5 | 4ziqA | 0.09 | 0.06 | 2.14 | 0.88 | CNFpred | | -------------------IVAAPVIAELNM--------PRFMASGDTSRL--TLDITNLTDK----PQKLNVALTASG--LLELVSDS--------------PAAVELAPGVRTTLFIPVRALP---GYGDGEIQATISGLAL |
6 | 2qsvA1 | 0.11 | 0.07 | 2.48 | 0.72 | HHsearch-2 | | ----------------------GPLQVSNARLL----FP-ISPEDEGV----VRLVVNNT-DS------DLQVAVVSLP-SFVS-----------------LDDRAFRLQAREPRELNLSLAVPRNPPG-KDEPLVLEVTSPET |
7 | 5ldyA3 | 0.14 | 0.12 | 4.29 | 0.85 | Neff-PPAS | | -TTQATPVMTVALPITTCQSSSGKRYYIGIVTHELYDNYGNEISGILTYNLGAGRYTTVTSQNSSVSGSNGLTRRSNSPVSHFILTSDAYTSQAACYAER-----------IANVNVTITVTAITDDFKTSAVNKVFILGTGSN |
8 | 2qsvA2 | 0.08 | 0.06 | 2.17 | 0.76 | HHsearch | | -----DNFPALTA------AQTG-VELS-T--Y----LD-GQLDGET--TK-AAIEIRNVGAG------PLRLSVTTRN-PALTA-----------------VPDRTEIKPGGSTLLRIAVDPQVKAEQSIAADISIICNDPQ- |
9 | 5bxgA | 0.10 | 0.10 | 3.56 | 0.70 | SP3 | | --EPKKEEKKDKEVVIGEKIISDEFSYDVLPKVKESLYTHYPAESGKVYID--IADIKNTQKQELNCSDLLTIEANYNDGYKYSSQTIVEDETTGFTYDNIS-----SIDPLETKGVRFIIDC-PDEVKTSDKPVILSFTFDGN |
10 | 4aq1A5 | 0.08 | 0.07 | 2.71 | 0.69 | PROSPECTOR2 | | VLQD-------------IKVDATSVKLSDEAV------GGGEVEGVNQKTIK--VSAVDQYGKEIKFGTKGKVTVTTNTEG--LVIKNVNSDNTIDFDSGNSATDQFVVDKIVNGKVEVKYFKNASDTTPT-STKTITVNVVNV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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