Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AISVGILSGIWGFISSPLGLLCWVGFVGCTSYYASGGKKEGLKKSIICNMTGVLWAMMIIITSEHFGSSVAGAVMTGIFSFVMCAQSKFKLLSFIPGTFCGSFSTFGAGGDWKLVIVSLLCGAALGYFSDMG |
1 | 5h36E | 0.11 | 0.11 | 3.86 | 1.20 | SPARKS-K | | GAVTGVGGGTIRDLVLGRTVLACLGVAVFTFFFAHIPQSRYRFLLWLDAVGLSLFAVTGAERALQTGAGPVIAIAMGVATATFGGILRDLLGIYITAALLGAAAFVALDPRELALGAGFAAAFLSRAAGLVW |
2 | 3rkoC | 0.10 | 0.10 | 3.62 | 1.07 | CNFpred | | LLMLGFFIAFAVKMPV-WLPDAHSQAPTAGSVDLAG----ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL |
3 | 5kbwA | 0.09 | 0.09 | 3.44 | 1.11 | Neff-PPAS | | KYDPSEIPALIVSFLLGPGVGMFVVLVKDILFFLMKSG--DPVGIAMNAVLGMSFVGIAGLIYHRNKGMIVATLFATAFALGLNALIVPLYFEAPFELYLKFFPFILAFNLVKFGIDSVVTFFVYKKVSSIL |
4 | 5edlA | 0.11 | 0.11 | 3.86 | 1.16 | SPARKS-K | | SIVFAVVYLLFTHFGNVLAGPIAYEPIYGIWFIVSVIAAYMIRKPGAALVSEIIAALVECLLNPSGPMVIVIGIVQGLGAEAVFLATRWKAVLMLAGMGSSVASFIYDLYLLIMLVIRLISGALLGLLGKAV |
5 | 2b6pA | 0.10 | 0.10 | 3.61 | 0.80 | FFAS-3D | | ALAFGLALATLVQAVGHISGPA----VTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLTIVEIFLTLQFVLCIFATLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLL--- |
6 | 4aw6A | 0.14 | 0.10 | 3.37 | 0.22 | HHpred | | ---FGGIPYLWRLSGQLATLFSALAGLPWSLYNTHGFNLDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAFTLVVSLVLVTIYIAPLFDKTPL----------------------------------- |
7 | 5t77A | 0.11 | 0.11 | 4.07 | 0.89 | MUSTER | | TSKDTLITSKILIAYTLGLPFYGIYSTISRSYHAIKNTKTPFIAATIVSLSNIILDIIFGLKYGPIGVALATSIAGIIGVLYLLFSVTFPIKDFLKISLNSLIMLFVIYNEFWFLIQILIGILVYLIFSSIF |
8 | 5gpjA | 0.11 | 0.11 | 4.06 | 1.01 | CNFpred | | GVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKDDWGGLFEAITGYGLGGSSMALFGRVGGG-PAVIADNVGDNVGDIAGMGSDLFGSESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLT |
9 | 2nuuD | 0.13 | 0.13 | 4.48 | 0.65 | HHsearch-2 | | GTVVHINAAIAGLVGAYPHNLPAILYIGWFGFNAGTANALAFVNTVVATAAAILGWIFGEWALGAIAGGVGGALIIGVVAGLAGLWGVTRGVHGVCGIVGCIMTGFAASTQLITIVWSGVVAFIGYKLADLT |
10 | 3p5nA | 0.08 | 0.08 | 3.25 | 1.10 | Neff-PPAS | | PYLTLDFSDVPSLLATFTFGPVAGIIVALVKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYFVLLPLYGMKVIIVSGIIPFNIIKGIVISIVFILLYRRL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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