Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | WELDFYSRPILDENKKKVWEVLICESPLEVRDEPDSTFRYAQYCSNTQVNSVWLRQALEEAMAQSGQSPQKIRFFRTQMNNMITKACNDLGISVTPSRRTFTLNRWIEERMREVYPNHPGFQANAPNPSVQMPTQAPESLPDALVGQQWAFVTLEASAFEEMHEWEIDFREAFPLKNLGITADTKIPGLIIFSPRALPLAGWLSGLDLGSIKIDSEKDRLLLETGVSDRWILANLKERALLTEAKGFEQAKQKAQGVHFLAVQSDPQAESFAGFWLLQ |
1 | 3hbjA | 0.12 | 0.11 | 3.92 | 0.70 | SPARKS-K | | HAAPLLSLVKKIATEAPKVTFSFFCTTFSRSNEFLPNIKYYNVHDGLPAMQENFKHVIDEAVAETGKNITCLVTDA--FFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGVHDVKSIDVLPGFPELKASDLPEGIKDIDVPFATMLHKMGLELPRANAVAINSFA----TIHPLIKFKLLLNVGPFNLTCLEWLDQH---------ENSSVVYISFGSV----VTPPPHELTALAESLEE-----CGFPFIWSFRGDPKEKLPKGFLER |
2 | 5xf7A | 0.12 | 0.10 | 3.55 | 0.62 | FFAS-3D | | ------TKPVHILEERSLLVLTPATQMLN-----QTRFLMVLFHNPSSKQSRNLAEELGKAVEIMGKGKNGIGFGK-VDITIEKELQQEFGITKAPEVESAALVVWLRRQIS--------------QKAFLFNS--SEQVAEFVISRPLVIVGFFAELFYDVIKDFPELTFVITIGNVIGRFHVTLDSVLVFKKGKQELNRVIKQHLTDFVIEELHIMSHML--------LFVSKSSESYGIIIQHYKLASKEFQNILFILVDADEPR---------- |
3 | 1c0mC | 0.15 | 0.10 | 3.39 | 0.53 | HHpred | | WQTDFTLEPRM--AP-RSWLAVTVDTA--------SSAIVVTQHG--RVTSVAVQHHWATAIAVLG-RPKAIKTDNGSCFTSTREWLARWGIAHTTGIPNRLLKDRIRVLAEG--------------------DGFMKRIPTSKQGE-------LLAKAMALNHKERGENTKTPIQKWPTVLTEG-P--PVK-IRI-ETGEWEKG---WNVLV-WGRGYAAVKNRDKVIWVPSRKV------------------------------------------ |
4 | 2vg8A | 0.13 | 0.12 | 4.00 | 0.70 | MUSTER | | LTVTFVIAGVLDSLPSSISSVFL--PPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGG-RLPTALVV---LFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEP-LMLPGCVPVAFLDPAQDRKDDAYKWLLHNTKRYKEAEGNAIKALQEPGLDKPPVYPVGPLVNIGK-ESECLKWLDN---------QPLGSVLYVSF------GGTLTCEQLNELALGLADS------QRFLWVIRSPSGIANSSYFDSH |
5 | 3votA | 0.10 | 0.09 | 3.16 | 0.75 | CNFpred | | -----------------GLKVTFFYNSAEDFPGNLPAVERCVPLPLF-EDEEAAMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPGLPFTTMENCRNKNKTRSILQQ-------NGLNTPVFHEF-HTLADLENRKLSYPLVVKPVN-KELEEAVRK---VEAVNQRDLNRFV---GKTGIVAEQ--------FIDGPEFAIETLSINVHVLSIGYKGGVYIAPAQLKEETRLAIVKEVTGAVSALQGPAHTELRLDK----DGTPYVIE |
6 | 1c0mC1 | 0.17 | 0.08 | 2.59 | 0.50 | HHsearch-2 | | WQTDFTLEPRM--AP-RSWLAVTVDTA--------SSAIVVTQHG--RVTSVAVQHHWATAIAVLG-RPKAIKTDNGSCFTSTREWLARWGIAHTTGIPGERANRLLKDRIRVLADGFMALNHK---ERGEN-TKT---PIQKHWRPT---------------------------------------------------------------------------------------------------------------------------------- |
7 | 1pc3A | 0.10 | 0.09 | 3.44 | 0.60 | Neff-PPAS | | -TVNISDAYLMAAHKGLMNIALAISALPGVSEHLKLNGKVLAAMYQGTIKT-WDDPQIAALNPGVNLPGTAVVPLHRS----------------DGSGDTFLFTQYLSKQDPEGWGKSPGFGTTVDFPAVPGALNGNGGMVTGCAETPGCVAYIGISFLDQASQRGLGEAQLGNSSGNFLLPD------AQSIQAAAAGFASKTPANQAISMIDGPAPDGYPIINYEYAIVNNRQKDAATAQTLQAFLHWAITDGNVHFQPLPPAVVKLSDALIATIS |
8 | 3kkrA | 0.15 | 0.07 | 2.44 | 0.66 | HHsearch | | WQMDNTH-------WNKTIIWVAVETN--------SGLVEAQVIPE--ETALQVALCILQLIQRYTV-LH-LHSDNGPCFHRIENLCKYLGITKTTGIPYNRAHRDLKDRLAAYQGD-------------------CETVEAAL------------SLALSLNKKRGGIGGHTPYEI-------------YLESEHTKYQ------------------------------------------------------------------------------ |
9 | 2vg8A | 0.12 | 0.10 | 3.66 | 0.70 | SP3 | | SSISSVFLPPVDLTD-----------LSSSTRIESRISLTVTRS------NPELRKVFDSFVEGG-RLPTALVVD--LFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGNAIKALQEPGLDKPPVYPVPLVNIGKQEESECLKWLDNQPLGSVLYVSFGSG-------------GTLTCEQLNELALGLADSEQR-----FLWVIRSPSGIANS-----S |
10 | 1hnna | 0.08 | 0.06 | 2.30 | 0.78 | PROSPECTOR2 | | AVASAYQ----RFEPRAYLRNNYAPPRGDLCNPNGV--------------GPWKLRCLAQTFATGEVSGRTLDITLEVNRQELGRWLQEEP----GAFNWSMYSQHACLIE-------------------------GKGECWQ-------------DKERQLRARVKRVLPIDVHQPQPLGAGSPAPLALVSSPDLASFQRALDHITHLLLIGALEESWYLAG---EARLTVVPVSEEEVREALVR--------SGYKVRDLRTQTGVDDVKGVFFAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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