Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MRKLCAVILSAVVWLVAAGTPASAAEHQSTLSAGYLQTHTDMPGSDDLNGINVKYRYEFTDTLGLITSFSYANAEGEQKTHYNDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYALAGVSYARVSSFAGDYVTLTSDEGKKQEHLTRSDSGRRSHTALTYSAGVQINPTENIVVDLAYEASGRGDWRTDAFIVGTGYRF |
1 | 3qraA | 0.36 | 0.27 | 8.08 | 1.68 | SPARKS-K | | ------------------------MEGESSISIGYAQSRVKEDLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESV--------LIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFG------------------QSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
2 | 3qraA | 0.36 | 0.27 | 8.07 | 2.27 | FFAS-3D | | -------------------------EGESSISIGYAQSRVKEDGDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEES--------VLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFGQSE------------------SRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
3 | 3qraA | 0.37 | 0.28 | 8.21 | 4.08 | HHpred | | ------------------------MEGESSISIGYAQSRVKEDGDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESV--------LIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFG------------------QSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
4 | 3qraA | 0.37 | 0.28 | 8.21 | 2.28 | MUSTER | | ------------------------MEGESSISIGYAQSRVKEDGYKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLI--------DGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFGQ------------------SESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
5 | 3qraA | 0.36 | 0.27 | 8.08 | 1.76 | CNFpred | | ------------------------MEGESSISIGYAQSRVKEKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESV--------LIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSS------------------FGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
6 | 3qraA | 0.37 | 0.28 | 8.21 | 1.76 | HHsearch-2 | | ------------------------MEGESSISIGYAQSRVKEDGDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESV--------LIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSF------------------GQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
7 | 3qraA | 0.36 | 0.27 | 8.07 | 2.74 | Neff-PPAS | | -------------------------EGESSISIGYAQSRVKEDLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESV--------LIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFG------------------QSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
8 | 3qraA | 0.36 | 0.27 | 8.07 | 2.34 | HHsearch | | ------------------------MEGESSISIGYAQSRVKEDGDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESV--------LIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSF------------------GQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYR- |
9 | 3qraA | 0.36 | 0.27 | 8.08 | 1.62 | PROSPECTOR2 | | M------------------------EGESSISIGYAQSRVGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFE--------ESVLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFGQSE------------------SRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF |
10 | 2k0lA | 0.15 | 0.12 | 4.08 | 1.19 | SAM | | -----------RIMKAIFVLNAAPKDNTWYAGGKLGWSQYHDTGRNDQLGAGAFGGYQVNPYLGFEMGYDWLGRMAYKGSV-------NGAFKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADSKGN-----------------YSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWVNNIGPDNGMLSLGVSYRF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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