Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LASRWSRLWASIIDAFVYAIFIVPVFLYGGLYDKLLSNETIELTEQVALTVYSWVVYFLCQGYLLHKKGQTIGKNLMDIAIVDMEGKQIGLLNIVGKRIIPMVAVAYIPFIGPFISTFDYLFVFRKDKRCLHDLIA |
1 | 5nl2A3 | 0.09 | 0.07 | 2.54 | 1.43 | SPARKS-K | | --RFPAYFTNLVSIIFMIAVTFAIVLGVIIYRISTAARVTVTATAVIINLVVIILLDEVYGCIARWLTKI-------------EVPKTEKFEERLTFKAFLLKFVNSYTPIFYVAFF------------------- |
2 | 6nf6A1 | 0.09 | 0.08 | 3.11 | 0.82 | FFAS-3D | | ------QKSGQLFSGLLALNVVFLGSAFISSMIF--NHVAITLADVWILLSILKVLCLCWIIYYLLGTSRQGSLLLFGTFSIINCKSKVEIVFPSIEILFVATQAFFLCGLMLTIATNLLLWLLAVTNDSIHME-- |
3 | 6ftg3 | 0.09 | 0.04 | 1.68 | 0.19 | HHpred | | --------GQYIMEGLASSFLFTMGGLGFIILDRSNAPIPKLNR-FLLLFIGFVCVLLSFFMARVFMRMKLPGYLM------------------------------------------------------------ |
4 | 5x5yG1 | 0.12 | 0.11 | 3.91 | 0.95 | MUSTER | | L--IGVTVFVAILAVLGVILGLALLFAFIDELNDISASYGIGDALRFIFLTAPRRAYDMLPMAALIGCLVGLGTLAS-LTIMRAAG--VSLSRIVWAVMKPMLVLMLAGILVGEYVAPWTENIAQS----GRALAQ |
5 | 3rkoB | 0.11 | 0.09 | 3.21 | 0.99 | CNFpred | | ----PTPVSALIHAATMVTAGVYLIARTHGLFLM---------TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMS-------QIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASG---SVILACHH |
6 | 3jacA | 0.10 | 0.10 | 3.54 | 0.68 | HHsearch-2 | | GGGFFHDALMFLADIVDIIIIIFGFW-AFGKHSAIASSSDDQVPQAFLMLLVQFGTMVI-DRAL-YLRKTVLGKLAFQVVLVVESNAVAQLWY--FVKCIYFALSLFLFLVPFLVELRAVMWVWTDTTLSLSNWMC |
7 | 5xjjA2 | 0.09 | 0.09 | 3.38 | 0.83 | Neff-PPAS | | -AGNPQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYADYVADLSPLLCLSFILDGFTAVLNGVARGSGWQHIGAWNNIFSYYLVGAPVGVYLAFRHLNGKGLWCGVVIGSTVQATVLAIVTASMNWKEQAEKA |
8 | 6fwyA2 | 0.10 | 0.05 | 1.92 | 0.43 | HHsearch | | -------------------------PNTEFSIT-ASKTADEGK----------------YHTFTYKTNKTTFSAKPAGMKIYDADGKEITNNTVLNSSFTIK---------------------VPVTTPSFKDSL- |
9 | 2dkcA1 | 0.09 | 0.07 | 2.78 | 0.93 | SP3 | | ---------------------MSIEQTLSQYLPSHPKPQGVTFMKADKLDYVTFTVGIIASLRSKYLQGKTVGVMITGVKVVDPLGSMLESSWEKYATDLANASPSPNSLVEVIKNLVSDLKIDLSIP-------A |
10 | 3nxcA2 | 0.10 | 0.08 | 2.99 | 0.62 | PROSPECTOR2 | | IEFIEDSLITRINLILLRLIVLLLLGFGERNPGLTRILTGHARLQGRINQLFERIEAQLRQVL---REKR-------------MREGGYATDETLLASQILAFCEGML-----------SRFVRSEFKYRPTDDFQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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