Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MSSTEYAPFYLRFIQFPSNEVLLYEYWKLVQNFVQKVSKITVRLAQIVGILGEKTIWKYQSTFNDGMLEGEVAKQEVSLTLRNSALLVASAIVIHFKSNFTNLLILSQITQYCRHRPKSKKSKYFPLYLSCLLRRRLTEFKITLLPLPWG |
1 | 4btgA1 | 0.13 | 0.11 | 3.94 | 0.52 | SPARKS-K | | ---------------VGKGNIDPVMYARLFFQYAQAVDELVNQFTEYHQSTANPEIWRKLTAYNRAIVPPTAILEQLRITTDFVCHVLSPLGFILPDANFSDLMLTALSSVDSKQATFKAKGALAPALISQHLANAATTAFERSRGN--- |
2 | 2fnoA2 | 0.14 | 0.11 | 3.87 | 0.52 | FFAS-3D | | ----------------PATRTLSAKIVNDANDVLDELQEFVPRLQKWIRIF-ADTGARNGLSAASGFLGTEIGVADIVTILWTTVADRFPAIKGIIEDTSPIIWGLSRLAALNSKSFEEYGNAYCGGEIEKSLRKVAS------------ |
3 | 4uw2A1 | 0.17 | 0.10 | 3.27 | 0.29 | HHpred | | YPWAELDFE--KELPVPGDSIRSQDYRELVKRLWEELSKAKLRSDRLL-PVLEKYLTFVSSVTS--------EGNIISLYDH-RTSAIALAL-RAGCTA--------------------------------------------------- |
4 | 1td6A2 | 0.14 | 0.13 | 4.34 | 0.62 | MUSTER | | -----VKPHLLQFV-LTDSELLELKRFSFFQALNQIPGFQGEQVEYFNSKLKQKFTLTLGEFEIAQQPDAKAYFEQLITQIQQLANEIIDAFLVSLHPPVPLAQLAAKIYEYVSQIVLNEAVNLK-DELIKLIVHTLYE----QLDRPV- |
5 | 1bg1A | 0.09 | 0.08 | 3.01 | 0.56 | CNFpred | | -------------------EQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPP---NICLDRLENWITSLAESQLQTRQQIKKLEELQQKVS-YKGDPIVQHRPMLEERIVELFRNLMKSAFVVERQPCMP |
6 | 2pffB | 0.26 | 0.25 | 7.83 | 0.77 | HHsearch-2 | | LSHGSLEHVLLVFIQEQFNKILDDEPAELVGKFLGYVSSLVQFDQVLNLCLTEFEN--CYLEGNDIHALAAKLLQENDTTLVKTKELIKNYIPFDKKSNSALFYFEELRDLYTYHVLVGDLIKFSAETLSELIRTTLDAEKVGLNILEWL |
7 | 2gtlF | 0.10 | 0.09 | 3.19 | 0.59 | Neff-PPAS | | -------------------KQCGVLEGLKVKSEWGRAYGSGHDREAFSQAIWRATFAQSRSLFKR--VHGDDTSHPAFIAHADRVLGGLDIAISTLDQPATLKEELDHLQVQHEGRKIP--DNYFDAFKTAILHVVAAQLGRCYDREAWD |
8 | 1keyB1 | 0.09 | 0.06 | 2.31 | 0.35 | HHsearch | | EQTAREILTLLGVHQGTGFQ-DIPK---RCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRL-----------------VFLAAFVVYLET-ETLVTREAVTEILGI-EPDREKGFH-L---------------D------- |
9 | 2jqqA | 0.13 | 0.12 | 4.15 | 0.51 | SP3 | | KTQSDLQKFMTQLDHLIKDDIDVLEYLKKLDEIYGSLRNHS-QLTEALSLG-KRLSKSLHEMCGIEPLESGLIEQLYKLITASRRILESSPYIHHLRNDYQDLLQEFQISLKILTEKCLENPSSLQNLSLTLVSIIKTA----------- |
10 | 2liga | 0.09 | 0.09 | 3.27 | 0.58 | PROSPECTOR2 | | MGGLLFSSL--------QHCQQGFVISNELRQQQSELTSTWDLMLQTRINLSRSAARMMMDASNQQSSAKTDLLQNAKTTLAQAAAHYAAEASANVDEKYQRYQALAELIQFLDNGNAQPTQGMQNALGEAL--GNYARVSENLYRQTFD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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