Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | HDIIGRLILLAARSPGLSKVYNSLLGFEGDEFYCKAWPSAVGASFGSLAERFPLATPIGVKTASGKIVIKPKMDYVIADKDEIVVLADDNDSYTCT |
1 | 4g65A2 | 0.17 | 0.16 | 5.16 | 1.65 | SPARKS-K | | EELVTSYIERLIQYPGA----LQVVSFALVAVKAYYGGPLVGNALSALREPHIDTRVAAIFRQGRPIR--PQGTTIIEADDEVFFVAASNHIRSVS |
2 | 5tj6A3 | 0.16 | 0.16 | 5.20 | 1.08 | FFAS-3D | | AELKLGFIAQSCLAPGFSTLMANLFTMRSMEMYTEYLSSFNALTFPEAAESKLKLLLLAIEVRESTLAINPGPKVKIENATQGFFIAESAEEVK-- |
3 | 5tj6A3 | 0.16 | 0.16 | 5.20 | 1.00 | HHpred | | AELKLGFIAQSCLAPGFSTLMANLFTMRGMEMYTEYLSAFNALTFPEAAELCLKLLLLAIEVRESTLAINPGPKVKIENATQGFFIAESAEEVK-- |
4 | 2aemA | 0.19 | 0.19 | 6.05 | 1.44 | MUSTER | | FVISGRLMSRSIDDGYEAMFVQDVLAEESTEVPIPEGSKLEGVSVLDADIHDVGVIIIGVGR-GDELIIDPPRDYSFRAGDIILGIGKPEEIERLK |
5 | 4g65A | 0.16 | 0.16 | 5.20 | 1.29 | CNFpred | | EELVTSYIERLIQYPGALQVVSFAEKVSLVAVKAYYGGPLVGNALSALREHMIDTRVAAIFRQ--GRPIRPQGTTIIEADDEVFFVAASNHIRSVM |
6 | 1lnqA | 0.18 | 0.18 | 5.77 | 1.17 | HHsearch-2 | | FVISGRLMSRSIDDGYEAMFVQDVLARRMVEVPIPEGSKLEGVSVLDADIHDTGVIIIGVGRG-DELIIDPPRDYSFRAGDIILGIGKPEEIERLK |
7 | 4j7cA2 | 0.17 | 0.17 | 5.48 | 2.18 | Neff-PPAS | | EKDMGVKIAQSLSDENVLNYID--LSDEYSIVELLATRKLDSKSIIDLNVRAKYGCTILAIKHHGDICLSPAPEDIIREQDCLVIMGHKKDIKRFE |
8 | 4j7cA2 | 0.16 | 0.16 | 5.18 | 1.58 | HHsearch | | EKDMGVKIAQSLSDENVLNYIDLSDEYSIVELLAT--RKLDSKSIIDLNVRAYGCTILAIKHH-GDICLSPAPEDIIREQDCLVIMGHKKDIKRF- |
9 | 4g65A2 | 0.16 | 0.16 | 5.20 | 0.82 | PROSPECTOR2 | | AELVTSYIERLIQYPGALQVVSAEEKVSLVAVKAYYGGPLVGNALSALREHHIDTRVAAIFRQG--RPIRPQGTTIIEADDEVFFVAASNHIRSVY |
10 | 4g65A2 | 0.17 | 0.16 | 5.16 | 0.89 | SAM | | -ELVTSYIERLIQYPGALQVVSFAEEVSLVAVKAYYGGPLVGNALSALREHHIDTRVAAIFRQ-GRPIR-PQGTTIIEADDEVFFVAASNHIR--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|