Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | HSATAARSCSYTLTIKTSCSSPKYTRDRVSIAFGDAYGFEVYAPRIDNPSSRIFETCSTDTFQIRGPCIYEICYLYLKRVGSDGWKPESVKVYGSDRPAITFKYNKLLPNGVWYGFNHC |
1 | 1gygA2 | 0.21 | 0.20 | 6.41 | 2.54 | SPARKS-K | | DPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLKKIDDIQNMWIRKRKYDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK-- |
2 | 1gygA2 | 0.19 | 0.18 | 5.71 | 1.96 | FFAS-3D | | DPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWEM--DNPGNDFMTGSKDTYTFKLKDIDDIQNMWIRKRKYDAYKPENIKVIANGKVVVDKDINEWISGNSTY----- |
3 | 1gygA2 | 0.21 | 0.20 | 6.41 | 2.34 | HHpred | | DPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLDEIDDIQNMWIRKRKYDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK-- |
4 | 1gygA2 | 0.21 | 0.20 | 6.41 | 2.77 | MUSTER | | DPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGK-TQEWEMDNPG-NDFMTGSKDTYTFKLKKIDDIQNMWIRKRKYDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK-- |
5 | 3o8yA | 0.18 | 0.16 | 5.20 | 1.79 | CNFpred | | ---------SYTVTVATGSQEHAGTDDYIYLSLVGSAGCSE-KHLLDK---GSFERGAVDSYDVTVEELGEIQLVRIEKRKNDDWYLKYITLKTPHGDYIEFPCYRWITGDVEVVLRDG |
6 | 1gygA2 | 0.21 | 0.20 | 6.41 | 1.63 | HHsearch-2 | | DPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLDEIDDIQNMWIRKRKFDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK-- |
7 | 1gygA2 | 0.20 | 0.19 | 6.18 | 3.00 | Neff-PPAS | | -PSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEW-EMDNPG-NDFMTGSKDTYTFKLKDIDDIQNMWIRKRKYTAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK-- |
8 | 1olpA2 | 0.22 | 0.20 | 6.35 | 2.57 | HHsearch | | ------DLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVK-EEWALDNPG-NDFTRNQEGTYTLKLKKYSDIKNMWIRDEKADGWKPSYVKVIAGDK-VRLEKINEWISGGTTYTLK-- |
9 | 1ca12 | 0.21 | 0.20 | 6.39 | 1.36 | PROSPECTOR2 | | SVGKNVK--ELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLKKIDDIQNMWIRKRKYDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK-- |
10 | 1gygA2 | 0.22 | 0.20 | 6.36 | 1.46 | SAM | | --SVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLKEIDDIQNMWIRKRK-DAYKPENIKVIANGKVVVDKDINEWISGNSTY----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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