>PF06166 (312 residues) EYIYYIAGIFLSIIAFLSFKDKSNSKRLLTGTFWGLFAISFIFGKVIPPMYMGVLVIIIA LIAGFGGVRMGSYHQTTEEERKASAKKIGNKLFIPALLIPLVTIIGTVVIKDMKIGNLFL LDNKNVTLVSLGVACVVSLIVAMMLTKEKGIQPVKESRRLLDAIGWAAVLPQMLATLGGL FAVAGVGKVVSDLISSAIPVDNRFFVVLAYVLGMAIFTMIMGNAFAAFPVITAGIGLPLL VHMHGADPAIMGAIGMFSGYCGTLLTPMAANFNIVPTALLDLSDKYAVIKAQAPTAIILL TVNIFLMYFLVF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EYIYYIAGIFLSIIAFLSFKDKSNSKRLLTGTFWGLFAISFIFGKVIPPMYMGVLVIIIALIAGFGGVRMGSYHQTTEEERKASAKKIGNKLFIPALLIPLVTIIGTVVIKDMKIGNLFLLDNKNVTLVSLGVACVVSLIVAMMLTKEKGIQPVKESRRLLDAIGWAAVLPQMLATLGGLFAVAGVGKVVSDLISSAIPVDNRFFVVLAYVLGMAIFTMIMGNAFAAFPVITAGIGLPLLVHMHGADPAIMGAIGMFSGYCGTLLTPMAANFNIVPTALLDLSDKYAVIKAQAPTAIILLTVNIFLMYFLVF | |||||||||||||||||||
1 | 4r0cA | 0.13 | 0.12 | 4.23 | 1.38 | SPARKS-K | VFTVAFAGVLSSLLAGLVFQLAG----RPPIAGIATAFAAVSGGFSANLLVGPVDATLAGLSTEAAHIIDPDRTVAA------------TGNYWFIIASTFLVTGLVTLITRTDAPQIHSVLGSPFIHGLVVIVALIAGICGAVYGRVNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLLTVPKVVLLLLFVVLTALINLMIGSA-SAKWSILAPVFIPMLMLL-GISPEASQAAYRVGDSSTNIITPLMPYFVLVLGFARRYQPETGLIALMLPYSLTLLLGWSVLLGVWIG | |||||||||||||
2 | 4r0cA | 0.14 | 0.13 | 4.59 | 1.06 | FFAS-3D | -FTVAFAGVLLIPLAGLVFQLAGRPPIAGIATAFALAGLSTEAAHIIDWFIIASTFLVTGLVTLITVADASVDAPQIHSRAMKWTGL--------TLAILLAGLALLVLPNDAPLRHPDTGSVLGLVVIVALIAGICGAVYGRVSGQFRNSGAVITAEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGTVPKVVLLLLFVVLTALINLMIGSASAKW-SILAPVFIP-MLMLLGISPEASQAAYRVGDSSTNIITPLMP-YFVLVLGFARRYQPETLIALMLPYSLTLLLGWSVLLGVWI- | |||||||||||||
3 | 4r0cA | 0.16 | 0.15 | 5.01 | 1.04 | HHpred | ------AGYVLIPLAGLVFQLAGPPIAGIATAFAAVSGLSTEAAHIIDNYWFIFLVTGLVTLITRTLTEPRLAHANVASVDAPQIHSRAMKWTGLTLAILLAGLALLV-LPND---AP-LRHPGSPGLVVILIAGICGAVYGR-VSGRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALPKVVLLLLFVVLTALINLMIGSASAKW-SILAPVFIPMLM-LLGISPEASQA-AYRVGDSTNIITPLMP-YFVLVLGFAR-R-YQPEIALMLPYSLTLLLGWSVLLGVWIG | |||||||||||||
4 | 4r0cA | 0.13 | 0.12 | 4.37 | 1.05 | MUSTER | PIAGIATAFAAVSGGFSANLLVGPVDATLAGLSTEAAHIIAATGNYWFIIASTFLVTGLVTLITRTLTEPRLAHANTVADDAPQIHSRAMKWTGLTLAILLAGLALLVLPNDAPLRHPDTGSVLGLVVIVALIAGICGAVYGRVSQFRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGTVPKVVLLLLFVVLTALINLMIGS-ASAKWSILAPVFIP-MLMLLGISPEASQAAYRVGDSSTNIITPLMP-YFVLVLGFARYQPETGLIALMLPYSLTLLLGWSVLLGVWIG | |||||||||||||
5 | 3rkoB | 0.13 | 0.13 | 4.43 | 1.44 | CNFpred | LSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLANLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAA-ELGTLNFREMVNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIART---HGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQT-DIKRVLAYSTMSQI--GYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHE-SIPLVYLCFLVGGAALSALPTAGFFSKDEILAGAMANG---HINLMVAGLVGAFMTSLYTFRMIFIVF | |||||||||||||
6 | 4r0cA | 0.14 | 0.14 | 4.67 | 1.65 | HHsearch-2 | DAGYVVLIPLAGLVFQL---AGRPPIAGIATAFAAVSGLSTEAAHITGNYWFIFLVTGLVTLITRTLTEPRLAHANTVSVDAPQIHSRAMKWTGLTLAILLAGLALLV-LPND---AP-LRHPGSPGLVVILIAGICGAVYGR-VSGRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALPKVVLLLLFVVLTALINLMIGSASAKW-SILAPVFIPMLM-LLGISPEASQA-AYRVGDSTNIITPLMP-YFVLVLGFAR-R-YQPEIALMLPYSLTLLLGWSVLLGVWIG | |||||||||||||
7 | 4r0cA | 0.12 | 0.12 | 4.28 | 1.49 | Neff-PPAS | GRPPIAGIATAFAAVSGGFSANLLVGPVDATLAGLSTEAAHIIDPATGNYWFIIASTFLVTGLVTLITRTLANTVADASVDAPQIHSRAMKWTGLTLAILLAGLALLVLPNDAPLGSVLGSPFIHGLVVIVALIAGICGAVYGRVSGQNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGTVPKVVLLLLFVVLTALINLMIGS-ASAKWSILAPVFIPMLMLL-GISPEASQAAYRVGDSSTNIITPLMPYFVLVLGFARRYQPEGTLIALMLPYSLTLLLGWSVLLGVWIG | |||||||||||||
8 | 4r0cA | 0.16 | 0.15 | 5.03 | 2.06 | HHsearch | VFTVAFAGYVLIPLAGLVFQLAGPPIAGIATAFAAVSGLSTEAAHIIDNYWFIFLVTGLVTLITRTLTEPRLAHANVASVDAPQIHSRAMKWTGLTLAILLAGLALLV-LPN---DAP-LRHPGSPGLVVILIAGICGAVYGR-VSGRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALPKVVLLLLFVVLTALINLMIGSASAKW-SILAPVFIPMLM-LLGISPEASQA-AYRVGDSTNIITPLMP-YFVLVLGFAR-R-YQPEIALMLPYSLTLLLGWSVLLGVWI- | |||||||||||||
9 | 4r0cA | 0.13 | 0.13 | 4.46 | 1.33 | PROSPECTOR2 | RFTVAFAGVLLIPLAGLVFQLAGRPPIAGIATAFALAGLSTEAAHIIDPIIASTFLVTGLVTLITRTLTEPRLAHANTVADASVDAPQIHSRAMKWTGLTLAILLAGLALLVLPNDAPLRHPDTIHGLVVIVALIAGICGAVYGRVSGQFRAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLLTVPKVVLLLLFVVLTALINLMIGSASAKW-SILAPVFIP-MLMLLGISPEASQAAYRVGDSSTNIITPLMPYFVLVLGFARRYQPETGLIALMLPYSLTLLLGWSVLLGVWIG | |||||||||||||
10 | 4r0cA | 0.15 | 0.12 | 4.01 | 0.64 | SAM | ------------------------------------------TGNYWFIIASTFLVTGLVTLITRTLTEPRLAHANDASVDAPQIHSRAMKWTGLTLAILLAGLALLV-----PNDAPL-RHP---GLVVILIAGICGAVYGR-VSGRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALPKVVLLLLFVVLTALINLMIGSASAK-WSILAPVFIPMLM-LLGISPEASQAAYRVGDSSTNIITPLMP-YFVLVLGFAR--RYQPEIALMLPYSLTLLLGWSVLLG---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |