Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MWVLIGIPIVVLGFALRFNPLLVVTIAGISTGLAGGMQTVEIISAFGKAFTDNRYMGLIWLTLPVIALLERNGLKEQAKHLISKIHVATTGRILMLYFFLRQMTAALGLNSLGGHAQMVRPLIAPMAEAAATTKYGDLPNDVRQKIRAHSAAADNVAVFFGEDIFIAVQSILLIKGFLDQYGIDVEPLHLSVWAIPTAIAALIIHFIRLWLLDRSL |
1 | 4r0cA | 0.15 | 0.14 | 4.81 | 1.06 | HHsearch-2 | | GLTLAILLAGLALLVDARHGLVIAGICGAVYGRVSGRNSGAVITAMEVTMASMAGYLLMFFAAQFVAWFNYSQLGLLLAVKGAAWGALTPKVVLLLFVVLTALINLM-IGSASAKWSILAPVFIPMLMLL------GISPEASQ---AAYRVGDSSTN----IITPLMPYFVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWI-GF |
2 | 4r0cA | 0.15 | 0.14 | 4.68 | 1.10 | HHsearch | | GLTLAILLAGLALLVDARHGLVIAGICGAVYGRVSGRNSGAVITAMEVTMASMAGYLLMFFAAQFVAWFNYSQLGLLLAVKGAALGALTPKVVLLLFVVLTALINLM-IGSASAKWSILAPVFIPMLMLL------GISPEASQAA---YRVGDSSTNI----ITPLMPYFVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWIGP- |
3 | 5u71A1 | 0.14 | 0.13 | 4.61 | 0.91 | SPARKS-K | | FYIYVGVADTLLGF---FRGLPLVHTLITVSKILHHLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLTVPVIVAFRAYFLQTSQQLKQLESEGR-SPIFTHLVTSLKGLWTLRAFGRQPYFTLFHKALNLHTANWFLYLSTWFQMRIEMIFVIFFIAVTFISILGRVGIILTIMSTLQWAVNSSIDVDSLMRSVSRVFKFID |
4 | 3wdoA2 | 0.12 | 0.09 | 3.29 | 0.99 | FFAS-3D | | ------LLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEH-----WKVYLATMLIAFGSVVPFIIYAEKRKMKQVFVFCVGLI---VVAEIVLWNAQFWQLVVGVQLFFVAF------NLMEALLPSLISKESPAGYKGTAMGVYSTSQF-------------LGVAIGGSLGGWIDG---MFDGQGVFLAGAMLAAVWLAVAS---------- |
5 | 4r0cA | 0.18 | 0.16 | 5.27 | 0.49 | HHpred | | ---LAGLALLVLPNPLRHSGLLIAGICGAVYGRVSGRNSGAVITAMEVTMASMAGYLVMFFAAQFVAWFNYSQLGLLLAVGAAWLGALKVVLLLLFVVL----TALINLMSASAKWSILAPVFIPMLMLL------GISPEASQAAYRVGDSSTNI-------ITPLMPYFVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWI--- |
6 | 4r1iA | 0.15 | 0.14 | 4.81 | 0.95 | MUSTER | | IALSALLAWSPFLKSIVVFIFLLFALPGIVYGRITRRGEREVVNAMAESMTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKELAGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAG------YA--PEVIQAAYRIGDS-----VTNIITPMMSYFGLIMATVMKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVL |
7 | 5uldA | 0.12 | 0.11 | 3.91 | 0.95 | CNFpred | | VVLGISMLAFIAVLWLTEHVTVTAILVPVMAVFFGIFETQAALNNF-----ANSIIFLFLGGFALAAAMHHQGLKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWIS-------NTATAAMMLPLVLGVLSKV----DADKQRSTYVFVLLGVAYSASIGGIATLVGTGPNAIAAAEV----GLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPT |
8 | 4r1iA | 0.15 | 0.14 | 4.68 | 1.06 | HHsearch-2 | | GVVFILSALLAWSIADGIHSILLFALPGIVYGRITRRGEREVVNAMAESMSTLGLYLIIFFAAQFVAFFNWTNIGQYIAVKGAVFKEVAGSVLFIGFIL---ICAFINIGSASAQWAVTAPIFVPMLMLA------GYAPEVI---QAAYRIGDSVTNII----TPMMSYFGLIMATVMKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVL |
9 | 5y50A1 | 0.12 | 0.11 | 3.95 | 0.85 | Neff-PPAS | | KLSYIAGAMIAVNSSMYVLQVISIMMVGHL-----GELFLSSTAIAVSFCSVTGFSVVFGLASALETLCGQANGAKQYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDAMVAQEAGKFATWLIPALFGYA---TLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWSLVFKFGLG---SLGAAIAIGVSYWLNVTVLGLYMTFSSSC |
10 | 4r1iA | 0.15 | 0.13 | 4.54 | 1.03 | HHsearch | | GVVFALSALLAWSIADGIHSILLFALPGIVYGRITRRGEREVVNAMAESMSTLGLYLIIFFAAQFVAFFNWTNIGQYIAVKGAVFKEVAGSVLIGFIL----ICAFINLMSASAQWAVTAPIFVPMLMLA------GYAPEVIQAA---YRIGDSVTNII----TPMMSYFGLIMATVMKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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