Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | YQSFKEFYPYYLSEHSNATCRRLHFLGTALVILLLVTLISTQNWSLLIALPLVGYGFAWVGHFFFEKNRPATFTYPLWSLMGDFVMFKDMLLGKV |
1 | 5nl2A3 | 0.11 | 0.09 | 3.45 | 0.99 | SPARKS-K | | ----------RFPAYFTNLVSIIFMIAVTFAIVLGVIIYRISVIINLVVIILLDEVYGCIARWLTKIEVPKTEKSFEERLTFKAFLLKFVNSYTP |
2 | 5tj6A | 0.14 | 0.14 | 4.64 | 0.77 | FFAS-3D | | WMTEAKDWAGELISGQTTTGRILVGLVFLLSIASLIIYFIDASTQQVDLAFNVFFMIYFFIRFVAANDKLWFWVE-LFSFVDYFTIPPSFV---- |
3 | 3wxvA | 0.15 | 0.14 | 4.62 | 0.24 | HHpred | | MPSFRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRQVFGMFFLGAVLCLSFSWLFHTV-YCHSEKV-SRTFS--KLDYSGIALLIM--- |
4 | 3rceA | 0.13 | 0.12 | 4.04 | 0.75 | MUSTER | | NETIMEVNTIDPEV---MQRISSSVLVFILSFIGFILLCKDHKSMLLALPMLALGFMALRAGLRF-----TIYAVPVMALGFGYFLYAFFNFLEK |
5 | 3rkoB | 0.04 | 0.04 | 2.07 | 0.87 | CNFpred | | -----ARTHGLFLM-TPEVLHLVGIVGAVTLLLAGFAALVQDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC |
6 | 3wxvA | 0.16 | 0.16 | 5.26 | 0.42 | HHsearch-2 | | MPSFRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRQEFGMFFLGAVLCLSFSWLFHTVYCHSTPKQTRAGVFLGLGPTMHFVKATTVMG |
7 | 4od4A2 | 0.07 | 0.06 | 2.55 | 0.74 | Neff-PPAS | | ---------IPALLGPKGALAASLAMHAAAVALFIAGVEAYGLGAIATVSTALTALVIILVQAMAWLGR------VKESFNLNLAVPIIIGAGII |
8 | 4f4lA | 0.20 | 0.09 | 3.04 | 0.34 | HHsearch | | --------------------------------------------SVAALLTVVFYIAAVMATNLYGATFPEWFGDLSKSLYTL----FQVMTLE- |
9 | 6mjpF3 | 0.08 | 0.08 | 3.27 | 0.97 | SP3 | | ALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALMVNTLDS |
10 | 3nxcA2 | 0.11 | 0.11 | 3.84 | 0.53 | PROSPECTOR2 | | IDSLITRINLILKDEKDTTARLRLIVLLLLGFGELTRILTGHARLQGRINQLFERIEAQLRQVLREKRMREGGYATASQILAFCERWPLIAAQLQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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