Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GGGTRGTCPATEKQLTALIPQNNLGLTAAAYPTFFFYVPESPTPKTVEFVLRDEKDSQVYEKTLTVTGASGIISLSLPAGELPPLEIGKNYQWYFSILCDPKNRAEDVSVDGWIQRVEPNPALAAKLEKAPPDERAALYVSAALWHDALVTLAQLRRERPDDSAIAERWIKLLQSVGLDTIAVEPL |
1 | 4z29A | 0.13 | 0.10 | 3.57 | 1.22 | SPARKS-K | | --------------LKLRVASD--ITLSPTYPDLVWE--NMGAQYGYTLVID---GT---SHAVPATSGE-MVRFRVPS-----LTPG-AHSFGVTVTEGGQAVGKG----GTIVWLSATKALVDGVARVDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEA |
2 | 4z29A | 0.13 | 0.10 | 3.38 | 1.01 | FFAS-3D | | -------------------------TLSPTYPDLVW--ENMGAQYGYTLVI----DGTSHAV---PATSGEMVRFRVPS-----LTPG-AHSFGVTVTEGGQAVGQT-EKGGTIVWLSADKALVDGVARGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQK-- |
3 | 4z29A | 0.12 | 0.09 | 3.25 | 1.07 | CNFpred | | ------------------------ITLSPTYPDLVWENMG--AQYGYTLVID------GTSHAVPAT-SGEMVRFRVP-----SLT-PGAHSFGVTVTEG-GQAVGQTEKGGTIVWLSEDKALVDGVAR-DEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEA |
4 | 4z29A | 0.12 | 0.10 | 3.44 | 1.02 | HHsearch | | --------------LKLRVAS--DITLSPTYPDLVWENMGAQY--GYTLVIDG---T---SHAVPA-TSGEMVRFRVPS-----LTPG-AHSFGVTVTEGGQAVGQ-TEKGGTIVWLSATEALVDGVATGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKE- |
5 | 4zzfA | 0.12 | 0.09 | 3.07 | 0.93 | SPARKS-K | | -------NSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKPAIQILNENNELVKTIPLKYNGQKGYINFEWDNEKGEKVPKG-NYKIKAEYNLDSKQYLQTRIGRGEVESVIFDKGKPMLRMGEMVLPIDSAIEFYQPDQK--------------------------------------- |
6 | 6aitA2 | 0.15 | 0.05 | 1.80 | 0.68 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------TSDLLDEWAKGNVRQQALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAIN-- |
7 | 4z29A | 0.12 | 0.10 | 3.41 | 0.47 | HHpred | | ---------------------VASDITLPTYPDLVWENMG---AQ-YGYTLVID-G-TSH--AVPA-TSGEMVRFRVPS-----LTPGA-HSFGVTVTEGGQAVG-QTEKGGTIVWLSATEALVDGVATGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKE- |
8 | 4z29A | 0.13 | 0.10 | 3.56 | 0.82 | MUSTER | | ----------LKLRVA-----SDITLS-PTYPDLVWE-----MGAQYGYTLVIDG------TSHAVPATSGMVRFRVPSLTP------GAHSFGVTVTEGGQAVGQT---GGTIVWLSATKALVDGVARVDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEA |
9 | 5jvkA | 0.07 | 0.05 | 2.03 | 0.61 | CNFpred | | --------------------------------NVAKNLGE--GNMRLTGKLVRYGDNLTFSGVANA---GKELVIDVT----------ELGYYTLELTLAD---NIIQTAVVNYAVVPEIIERP-PPKDNDYSKTFRLIRMAGFTRIRTDLAWEHVEPAKGKYVMPEHMYQFVSASGIKPLIVFGY |
10 | 4z29A | 0.12 | 0.10 | 3.44 | 0.83 | HHsearch-2 | | --------------LKLRVAS--DITLSPTYPDLVWENMGAQ-Y-GYTLVIDGT----S--HAVPA-TSGEMVRFRVPS-----LTPG-AHSFGVTVTEGGQAVGQ-TEKGGTIVWLSATEALVDGVATGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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