Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | KTKKTLIGLGLGQILSLLCTSNAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRPTIKGKWYHYFLLALVDVEGNFLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRLMKISGVLICIAGVVMVLFSDVHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLFGAIISAIQVAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILLRTNGSTMFTLSLLTSDMWAVLIRIFAYHEKVDWLYYLAFATTAIGLIIYSM |
1 | 5y78A | 0.10 | 0.10 | 3.56 | 2.65 | SPARKS-K | | TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMW-KYPWVLSTIQLGVGALYCTFLWVLGLNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATE--------LTFTWTGFITAMISNVAFVTRNITSKFTMVDFIAQNTYALITIISFFMELPFALLMEGFPPLVSVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
2 | 5i20A | 0.11 | 0.11 | 3.91 | 3.26 | FFAS-3D | | -SRS--SATLI--GFTAILLWSTLALATSSTGAV-PPFLLTALTFTIGGAVGIAAGLARGVSVLRQPWPVWVHGIGGFGYHFFYFSALKLAPPAEAGLVAYLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGAR--AGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILF-----EPSVWPVGSEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGALAIACALIVGGAAVATL |
3 | 5y78A | 0.10 | 0.10 | 3.65 | 2.63 | HHpred | | TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNM-WKYPWVLSTIQLGVGALYCTFLWVLGLRTSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATEL--------TFTWTGFITAMISNVAFVTRNITSKFTMVDLIAQNTYALITIISFFMELPFALLMEGFPPLVAGVSKAKFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
4 | 5y78A | 0.10 | 0.10 | 3.65 | 2.20 | MUSTER | | PTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRTKPKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFT--------WTGFITAMISNVAFVTRNITSKFTMVTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
5 | 5y78A | 0.10 | 0.10 | 3.55 | 1.84 | CNFpred | | TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMW-KYPWVLSTIQLGVGALYCTFLWVL-PNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATE--------LTFTWTGFITAMISNVAFVTRNITSKFTMV-LIAQNTYALITIISFFMELPFALLMEGFPPLVSVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
6 | 5y78A | 0.10 | 0.10 | 3.56 | 2.61 | HHsearch-2 | | TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNM-WKYPWVLSTIQLGVGALYCTFLWVLGLRVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATEL--------TFTWTGFITAMISNVAFVTRNITSKFTMVDLIAQNTYALITIISFFMELPFALLMEGFPPLVSGVSKKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
7 | 5i20A | 0.15 | 0.14 | 4.75 | 2.90 | Neff-PPAS | | ---SRSSATLIGFTAILLWSTLALATSSTGA---VPPFLLTALTFTIGGAVGIAAGLARGVVLRQPWPVWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAYLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGARAGGFG--FAPEYVPGYLAAAACAVIWSVYSVASRRFAR--VPTEVVAGFCLATAALSALCHILFEP---SVWPVGSEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGALAIACALIVGGAAVATL |
8 | 5y78A | 0.10 | 0.10 | 3.55 | 3.89 | HHsearch | | TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNM-WKYPWVLSTIQLGVGALYCTFLWVLGLRVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATEL--------TFTWTGFITAMISNVAFVTRNITSKFTMVDLIAQNTYALITIISFFMELPFALLMEGFPPLVSGVSKKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYS- |
9 | 5y78A | 0.10 | 0.10 | 3.56 | 2.31 | PROSPECTOR2 | | SPTLVHTLKVGFYFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRTKPNLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATE--------LTFTWTGFITAMISNVAFVTRNITSKFTMKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
10 | 5y78A | 0.10 | 0.10 | 3.65 | 2.49 | SAM | | -TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRTKKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATEL--------TFTWTGFITAMISNVAFVTRNITSKFTMVDLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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