Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MIHLQSAQKLQMLEKSLRMVLPESLKVYGTVFHMNQGNPFKLKALVDSWPDFNTVVIRPQEQEMTDDLDHYTNTYLIYSKDPEQSQEFLGSPAVINWKQHLQIQSSQSNLNRVIQNLVDINLSKVKHTQCNLYMVYDTAKKLAPSLVDVKNLSPKGDKPKPLDQEMFKLSSLDVTHAALVNQFWHFGGTERSQRFIERCIRTFPS |
1 | 1sqhA | 0.13 | 0.12 | 4.03 | 1.32 | SPARKS-K | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQRKQFYTHNFRTWGTYVSLHRDIV---------QSVSFFSWQAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQPRQCFGVLS---------HEDAFCAK------VPDLPSEFEIRRLRAEDAAV-HDSWPNKG-EGSLTYLQALVRFNKS |
2 | 1sqhA | 0.13 | 0.11 | 3.90 | 1.82 | FFAS-3D | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQRKQFYTGNFRTWGTYVSLHRDI---------VQSVSFFSDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQPRQCFGVLSHEDAF---------------CAKVPDLPSEFEIRRLRAEDAA-VHDSWPNKGE-GSLTYLQALVRFNKS |
3 | 1sqhA | 0.13 | 0.12 | 4.07 | 2.62 | HHpred | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQILNHISLKQFYTHRRGNFRHRDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQRQCFG-VLSHED---------AFCKV-------PDLPSEFEIRRLRAEDAA-VHDSWPNKGE-GSLTYLQALVRFNKS |
4 | 1sqhA | 0.13 | 0.12 | 4.08 | 1.30 | MUSTER | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQILNHISLKQFYTHRRGNFRTWDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQPRQCFGVLS---------HEDAFCA------KVPDLPSEFEIRRLR-AEDAAVHDSWPNKG-EGSLTYLQALVRFNKS |
5 | 1sqhA | 0.14 | 0.12 | 4.18 | 1.91 | CNFpred | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDR-RKQFYTHNFRTWGTYVSLHRD------IVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAQPRQCFGMVLSHEDAFC---------------AKVPDLPSEFEIRRLRAEDAAMVHDSWPNKG-EGSLTYLQALVRFNKS |
6 | 1sqhA | 0.13 | 0.12 | 4.20 | 3.80 | HHsearch-2 | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQILNHISLKQFYTHRRGNFLHRDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQRQCFG-VLSHED---------AFCKV-------PDLPSEFEIRRLRAEDAA-VHDSWPNKG-EGSLTYLQALVRFNKS |
7 | 1sqhA | 0.12 | 0.11 | 3.94 | 1.70 | Neff-PPAS | | -LRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQIPNHISLRKQFYTHRRGNFRTWIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQPRQCFGVLSHEDAFCA---------------KVPDLPSEFEIRRLRAEDAA-VHDSWPNKG-EGSLTYLQALVRFNKS |
8 | 1sqhA | 0.13 | 0.12 | 4.06 | 6.06 | HHsearch | | ILRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQILNHISLKQFYTHRRGNFRHRDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQRQCFG-VLSHED---------AFCKV-------PDLPSEFEIRRLRAEDAA-VHDSWPNKG-EGSLTYLQALVRFNK- |
9 | 1sqhA | 0.12 | 0.11 | 3.81 | 1.51 | PROSPECTOR2 | | GLRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQIPRNDLRKQFYTHRRGNSLHRDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQPRQCFGVLSHEDAF---------------CAKVPDLPSEFEIRRLRAEDAA-VHDSWPNKGE-GSLTYLQALVRFNKS |
10 | 1sqhA | 0.13 | 0.12 | 4.06 | 1.62 | SAM | | -LRPLSDSEVDELLDLYKVKFGIRNFHYLLLYNQRKWDRQLSEAQILNHISLKQFYTHRRGNSLHRDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRGVTAIQRQCFG-VLSHED---------AFCKV-------PDLPSEFEIRRLRAEDAA-VHDSWPNKGE-GSLTYLQALVRFNKS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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