>PF06020 (365 residues) TPHDIVIQFVTSVDTGSIRSELAEDCIFSFFGRHVRGVNAIMGYVRTQLLGRFQHERFDR AQIVSQSHELILKERFGRSFDVVRRRIYEQKERERATTLHLRAESDDEEVPSRYPVQLVT PPRASSHSMDQLTFVEACGVLESLRDSNFSGGLDLGDLVPMHLTLGYRLTPVVLGNLRAI EICLAIYEKYPLKLNRSTLVPPPTVEEIFGIGRLRNTTLAPANPQTDDEGEEVPQARSLS VRRILFADGADEDGDEDTDGSVEEKKDDASEPDLPDQNQEEDKDEPEQQGEQEEQQQQQP EEAPASSSSSTAQEETNPPAEPIVGERNPPEKSIICSLTPRKRTQTTNVCEVEPKRTPLR TRMRF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TPHDIVIQFVTSVDTGSIRSELAEDCIFSFFGRHVRGVNAIMGYVRTQLLGRFQHERFDRAQIVSQSHELILKERFGRSFDVVRRRIYEQKERERATTLHLRAESDDEEVPSRYPVQLVTPPRASSHSMDQLTFVEACGVLESLRDSNFSGGLDLGDLVPMHLTLGYRLTPVVLGNLRAIEICLAIYEKYPLKLNRSTLVPPPTVEEIFGIGRLRNTTLAPANPQTDDEGEEVPQARSLSVRRILFADGADEDGDEDTDGSVEEKKDDASEPDLPDQNQEEDKDEPEQQGEQEEQQQQQPEEAPASSSSSTAQEETNPPAEPIVGERNPPEKSIICSLTPRKRTQTTNVCEVEPKRTPLRTRMRF | |||||||||||||||||||
1 | 2pffB | 0.19 | 0.16 | 5.21 | 1.01 | HHsearch-2 | TPAELVGKFLGYVSSLVEPSKVGQDQVLNLFENCYLEGNDI--------HALAAKLLQENDTTLVKTKEL-IKN-------YITARIMAKRPFDKKSSALFRAVTDDYFEEYQTYHVLVSAETLSELILAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISC------PLIGVIQLA----HYVVTAKLLPGELRSYLKGATGH-SQG----LVT---AVAIAETDSW-E----SFFVSVRTVLFFIGRCYEAYP--NTSLPPS--------ILEDSLENNEGVPMLSISNEQVQNKTNSHLPAGKQVEISL--VNGAKNLVVSSHLLVPASDLINKDLVKNNVSFN-----AKDIQIPVYDTF | |||||||||||||
2 | 2bsgA | 0.09 | 0.08 | 3.09 | 1.44 | Neff-PPAS | ----------QYGSEGSMNRPTVS------VLRNVEVLDKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIE----------VGNLREELVYSRLNEID----------TKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVN----------GTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDG | |||||||||||||
3 | 5gaoE | 0.05 | 0.04 | 1.89 | 1.29 | PROSPECTOR2 | AAAAAAA-----------------------------------------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTNKK | |||||||||||||
4 | 4ewcA | 0.14 | 0.12 | 3.91 | 0.96 | SPARKS-K | NLNDLKAAFRQSRKRSDYRSSISNQCALQLFAPGVKNASYTTLAEGANIPSKYRHRNCGGV-ALDLGKRIKNSKIFSIIQKKVRGRCRTEEQRLLTSALKI---SDGENKFQRIDTLLIDPPRTTK------CFIPPISSLYIQEGNSVLADFKNGEDCKICLKVGVNSTFTS-----VARTCVAVS-----------VATAFCSADIPGSERYRSNIKANTTKPKKDSTYTIQGLRLSNVR----YEA---RPEDRSWQVNVTDSFGGLAVFNQGAIRELVRALVKRILKSASERSARAVKTFVGEQGKSAIVISGVGLFS-IDF--------------------------------------- | |||||||||||||
5 | 2b9mY | 0.12 | 0.10 | 3.58 | 0.60 | FFAS-3D | --AQRLEGLRGYLDIPQKETRLKE--------------------LERRLED-------PSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELMEELPAEEREALKPELEEYHQTLLNFPHAEKNAILTIQP-----------GAGGTEACDWAEMLLRMGFQLTPGPEAGIDYAQILVKAYGLLSPEAGVHRLVRPSPFDA-SGRRHTSFAGVEVIPEVDEEVEVVLKPEE---LRIDVMRASGPGGQGVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELERKKREEELKALRGEVRPIEWGSQIRSYVLDKNYVKDHRTGLMRHDPENVLDAGRRQGTEEVEAE------------ | |||||||||||||
6 | 3h3hB | 0.09 | 0.02 | 0.94 | 0.33 | HHpred | FAQQFSREWIDAWNAHDLDAHYADGFES-SPSGRLRGKEQVGAYWREALR--IPDLHFEWIATLAGVDS---------------------------VAIHYRGAK-------------------GRLALEVFH-FGPDRRVVKAL-AHYA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6etxG | 0.11 | 0.10 | 3.73 | 0.93 | MUSTER | NQLSRLHMILKPFIKKDVENELSDYCQLTSRQKLL---QALK--LVMQFRKVCNHELFERQETWSHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFL----RFIDISPAE--------MANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQ-------RYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYE---RRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLY--TRLKSQGHRY | |||||||||||||
8 | 1h2vC | 0.13 | 0.03 | 1.13 | 0.59 | CNFpred | FGGEFVEAMIRQLKESYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQ-------EEDVPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2d0tB | 0.11 | 0.08 | 2.85 | 0.32 | HHsearch-2 | NDWFIAKHLPDLIESGQLRERVEKLNMLSIDHKSQRLARLVLGC----ITMAYVWGKGHDVRKVLPRN-------IAVPY-------------------------------CQLSKKLELPPILV--------YA-DCVLANW-KKKDPNKPLTYENMDVLFSFRD-------GDCSKGFFLVSLLVEIAAAAIKRKALLEIAS--CLEKALQVFHQIHDHVNPKA----------FFSVLRIYLSGWKGNPQSDGLVYEGFW------EDPKFAGGS-----------AG---------------QSSVFQCFDV------LLGIQQTAGLQDMRRYMPPAHRNFLNPSILIPASQGGTDLMNF | |||||||||||||
10 | 3cnfT | 0.08 | 0.08 | 2.99 | 1.41 | Neff-PPAS | -----MWHYTSINNDTRVALDPKPNQIRTITSHTLRLLGPFQYFNFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQ-------DAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEAIPLSSSTYVQRLAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQGRIKHSLAVTGTTEHTIADIT----------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |