Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | LQGLSVSTGALEQIRHVEMQAKDLRNQLLGFRSAISSHGSKMDGLEKELSHLNQEFETLQEKAQVNSRKAQTLYNNIDQTIQNAKELDMKIKNIIQNVHILLKQIARPGGEGMDLPVGDWSRELAEAQRMLRELRGRDFKKHLQEAEAQKMEAQLLLNRIRTWLESHQVENNGLLKNIRDSLNDYEAKLQDLRSVLQEAAAQGKQATGLNHENEGVLGAIQRQMKEMDSLKNDLTEHLATADASLLQTNSLLQRMDTSQ |
1 | 6ek7A1 | 0.11 | 0.10 | 3.80 | 1.03 | SPARKS-K | | ----IFTKEDLINLKLYVRKGLSLQDEVEAYLKKIDVAGLEPKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTGNEIINLINITLRVKTLLGDITDKQLENITSADHEVASALKDILDDMKGDINRHQTENVRKKVSDYRITLTGLEPQVKTKYDLMEKSNQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMINNALR-LTSFVNKFQQVITPWQSVGDSARQLVDIFDEAI |
2 | 2tmaA | 0.09 | 0.08 | 3.11 | 1.83 | FFAS-3D | | MDAIK------KKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELD------------RAQERLATALQKLEEAEKAESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDAYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAER-- |
3 | 4uxvA | 0.09 | 0.07 | 2.84 | 0.82 | HHpred | | ----QVLVHIDDLLTAAESSIEKILREISDLVTSEEKSREEIEQVRERYSKSRKNLLAYSHLYGELYDSLEKDLDEIW--YITARKVLLEQDRNLERLQSYIDDVPKLLAD----CKQTVPGQIAKLKDGYGEMKEKGYKLEHIQLDKELENLSNQLKRAEHVM-TEL-----DIDEASAILQLIDENIQSVYQQLEGAGQSVLSK---MPELIIAQQAFEKRLDEIGKLLSSVKDKLDAE------------------ |
4 | 5nnvA | 0.12 | 0.11 | 3.81 | 1.31 | MUSTER | | ---------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETL--------QAEVKQLRAQVKEKQQ----------LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES-SSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL- |
5 | 5j1iA | 0.09 | 0.08 | 3.11 | 1.03 | CNFpred | | ----------ARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVL-AAPTLRSELELTLGKL----EQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQ--AVPATLPELEATKASLKKLRAQAEA--QQPTFDALRDELRGAQEVGERLQQRHG-EVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQA-SQAVREQLRQEQALLEEIERHGEKVEECQ |
6 | 4uxvA | 0.14 | 0.14 | 4.58 | 1.51 | HHsearch-2 | | ISDLVTSEKSREEIEQVRERYSKSRKNLLAYSH---LYGELYDSLEKDLDEIW------YIT-------ARKVLLEQDRNLERLQSYIDDVPKLLADCKQVIAKLKDYKEKGYKLEHIQLDKELENLSNQLKRAEHVMTELDIDEASAILQLIDENIQSVYQQL-EGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVQALDEIGASIEKQIEEVKKEHAEYRENLQALRKEELQARETLSNLKKTISETRLLK |
7 | 5nnvA | 0.13 | 0.11 | 3.91 | 1.70 | Neff-PPAS | | ---KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-------------------------LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSE-SSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL- |
8 | 4uxvA | 0.12 | 0.12 | 4.22 | 1.94 | HHsearch | | KKANQVLVHIDDLLTAAESSIEKILREISDLVTSEEKSREEIEQVRERYSKSRELYDSLEKDLDEIWITARKVLLEQDRNLERLQSYIDDVPKLLADCKQVIAKLKDYKEKGYKLEHIQLDKELENLSNQLKRAEHVMTELDIDEASAILQLIDENIQSVYQQL-EGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVKESYRLLDEIGKLVASIEKQIEEVKKEHAEYRENLQALRKEELQARETLSTISET- |
9 | 2yfaA | 0.12 | 0.11 | 3.82 | 1.29 | PROSPECTOR2 | | -------GSHMGDIGQLNKDLTDLRIARLQYMIA-NGDDTAAANTLAKLDAFSKQQAYLATTFK--SPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSS-----------AIRADQAMDALSQEVMARPEDSVRLAQYQLISKARQQLLQVRIDVRGIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFR----DAVANITTSRAEMTVQGADIVKRSDALYQIQLER |
10 | 4uxvA | 0.18 | 0.15 | 5.04 | 0.59 | SAM | | ISDLVTSEKSREEIEQVRERYSKSRKNLLAYSHL---YGELYDSLEKDLDEIW-------------YITARKVLLEQDRNLERLQSYIDDVPKLLADCKQVPGQIAKMKEKGYKLEHIQLDKELENLSNQLKRAEHVMTELDIDEASAILQLIDENIQSVYQQL-EGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVKESYRLTAGELGKQQAFEKRLDEIGKLLSSVKDKLDAEH----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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