Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | DFLSSLPPKHQAKALREIDLLAEFGNALKEPYVKHIKGDIWELRIRFSSDISRVFYFTWQADTIVLLHGFVKKTQKTPPQEIETAQNRM |
1 | 2kc9A | 0.12 | 0.11 | 3.93 | 2.00 | SPARKS-K | | KEWRKLGSTVREQLKKKLVEVLESPRIEA----NKLRPDCYKIKL--RSSGYRLVYQVIDEKVVVFVISVGKAEAS---EVYSEAVKRI |
2 | 2kc9A | 0.14 | 0.12 | 4.24 | 1.08 | FFAS-3D | | --WRKLGSTVREQLKKKLVEVLESPRIEANK----LRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKAEAS---EVYSEAVKRI |
3 | 2kc9A | 0.15 | 0.13 | 4.54 | 2.02 | MUSTER | | KEWRKLGSTVREQLKKKLVEVLESPRIEA----NKLRGDCYKIKLRSSG--YRLVYQVIDEKVVVFVISVGKAEAS---EVYSEAVKRI |
4 | 5ja8A | 0.15 | 0.13 | 4.55 | 1.44 | HHsearch-2 | | KYRDEYL-S-DEEYRLFQAELMLNPK-L----GDVIQGGLRKIRVAS-RGGSRIIYYFLDERRFYLLTIYGKNEMDLNANQRKQLMAFM |
5 | 2kc9A | 0.13 | 0.12 | 4.26 | 1.92 | Neff-PPAS | | KEWRKLGSTVREQLKKKLVEVLESP----RIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKAEA---SEVYSEAVKRI |
6 | 5ja8A | 0.14 | 0.12 | 4.24 | 2.07 | HHsearch | | KYRDEYL-S-DEEYRLFQAELMLNPK-L----GDVIQGGLRKIRVAS-RGGSRIIYYFLDERRFYLLTIYGKNEMDLNANQRKQLMAF- |
7 | 5ja8A | 0.15 | 0.13 | 4.55 | 1.67 | SPARKS-K | | KYRDEYLSD--EEYRLFQAELMLNPK-----LGDVIQGGLRKIRVA-SRGGSRIIYYFLDEKRFYLLTIYGKNEMSLNANQRKQLMAFM |
8 | 5ja8A | 0.14 | 0.12 | 4.25 | 1.90 | MUSTER | | KYRDEYLS--DEEYRLFQAELMLNPK-----LGDVIQGGLRKIRVASRGG-SRIIYYFLDERRFYLLTIYGKNEMSLNANQRKQLMAFM |
9 | 2kc9A | 0.13 | 0.11 | 3.92 | 1.07 | HHsearch-2 | | KEWRKLGSTVREQLKKKLVEVLESPRIEA----NKLRGDCYKIKLRSS--GYRLVYQVIDEKVVFVISVGKAEA-S---EVYSEAVKRI |
10 | 5ja8A | 0.15 | 0.13 | 4.55 | 1.77 | Neff-PPAS | | KYRDEYLS--DEEYRLFQAELMLNPK-----LGDVIQGGLRKIRVA-SRGGSRIIYYFLDEKRFYLLTIYGKNEMSLNANQRKQLMAFM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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