Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MFVDDKTFVVYKTWPTGLIQGTRKSVPFPTRHSCTFSSDVRIDNSYSSVVLSNPTFVQLLKMCVHIKRVQWKGKIILLFECDNKPPPFRL |
1 | 3l7yA1 | 0.06 | 0.06 | 2.49 | 0.75 | SPARKS-K | | EKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFLVNSFSPLPERFFKLTLQVK-EEESAQIMKAIADYKTSQRLVGTASGFGYIDIITK |
2 | 5ubaA | 0.15 | 0.14 | 4.84 | 0.43 | FFAS-3D | | ILHQDKNLVVINK-PYGLPVHGQLCITLHGHKAEPLHLCHRLDKETTGVMVLAWDKDMAHQVQELFRTRQVVKKYWAITVHVPMPS---- |
3 | 1epuA1 | 0.14 | 0.11 | 3.80 | 0.23 | HHpred | | -----------AEWKVLIVDQLSR-VSACCK-HEI-SEGITINPLLEAVYLITPTEESVKCL-ADFQNPPQYRGAHIFFTE-ACPEEL-- |
4 | 5xxzA | 0.10 | 0.10 | 3.70 | 0.64 | MUSTER | | AKKNGRKFDVTEGKDGITVSDNKVYIPKNPDGSYTISKRDGVTLSDYYYLVEDRAGNVSFATLRDLKAVGKDAVVNFGLDLPVPEDKQIV |
5 | 2piaA | 0.14 | 0.11 | 3.80 | 0.69 | CNFpred | | -----RYVIAVKRDSISFIDDTGDAVEVS-----LPRNEFPLDKRAKSFILVAGGITPMLSMARQLRAEG-LRSFRLYYLTRD------- |
6 | 1on8A | 0.13 | 0.12 | 4.27 | 0.33 | HHsearch-2 | | LMVDDDTLISAQQFPDQIIGFVPRKHVSTSSGIYSYGGGPGNGDQYS-MVLFTQNCDDIAMNFLRHTGKPS--GIFVKINLEKETNGYSG |
7 | 2qrrB | 0.05 | 0.04 | 2.09 | 0.67 | Neff-PPAS | | PNRVEGSYPLVREFTGATVDAPLSQISYNIDVSILSSDLDYAGGVKFGVAELFGNEQDDSAAIEYLRENNVKVEVLGYVL---------- |
8 | 6eznG1 | 0.12 | 0.10 | 3.57 | 0.43 | HHsearch | | -----RTLVLYQSTLEDLEQ-RNYKLEYINSTTVDLYD-KEQR-LFDNIIVFPTKRQPVKQLIKFFEN---EGNILCMSSPGAVPNTIR- |
9 | 1gd9A | 0.17 | 0.17 | 5.46 | 0.59 | SP3 | | AFLKDGEEVLIPTYAPAVILAGGKPVEVPTYEEDEFRLNVDVTDKTRALIINSPTKKDLEEIADFVVEH----DLIVISDIYDDARHYSI |
10 | 4aq1A6 | 0.07 | 0.07 | 2.71 | 0.40 | PROSPECTOR2 | | ASTADVDFINFESVEIYTLDSNGNRLKKVTPTATTLVGTNDYVEVNGNVLQFKGNDE--------LTLLTSSSTVNVDVTADGITKRISA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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