Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LLPHINSRDTSSVALAQTSNEIRTTLDKLTDVEAESLRVGRRNVELTAEVLRLAEEAERRKAGETDDPAVQAQMASLQAELKASRQRWKVMKGTASAVVAGSGVDWARDEELREMVLD |
1 | 3ajwA | 0.08 | 0.08 | 2.98 | 1.16 | FFAS-3D | | LETLKDLADDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNYQQFIQTLEKAIEQHRLQ------LTQWTQKVDLALKSWREKKQRLQAWQTLQDRQTA---AALLAENRMDQKKMD |
2 | 5z08D | 0.64 | 0.23 | 6.53 | 1.93 | HHpred | | ----------------------------------------------------------------------------HEAEMKSNRRRWRIMKGAASAIVAGSGIDWVRDERLRDLVLD |
3 | 5z08D | 0.64 | 0.23 | 6.53 | 2.21 | HHsearch-2 | | ----------------------------------------------------------------------------HEAEMKSNRRRWRIMKGAASAIVAGSGIDWVRDERLRDLVLD |
4 | 3na7A1 | 0.07 | 0.07 | 2.82 | 1.09 | Neff-PPAS | | IREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIK-SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALE |
5 | 5z08D | 0.63 | 0.22 | 6.30 | 3.06 | HHsearch | | ----------------------------------------------------------------------------HEAEMKSNRRRWRIMKGAASAIVAGSGIDWVRDERLRDLVL- |
6 | 5z08D | 0.66 | 0.23 | 6.53 | 1.44 | FFAS03 | | -----------------------------------------------------------------------------EAEMKSNRRRWRIMKGAASAIVAGSGIDWVRDERLRDLVLD |
7 | 3k29A | 0.14 | 0.14 | 4.60 | 1.13 | FFAS-3D | | LEPVLSRVDRAEKVVKEKRRLLELEQEKLRERESERDKVKNHYKVVAIQLSEEEEKVNKQKEN---VLAASKELERAEVELTKRRKEEEKTRLHKEE----WKEALKEEARQEEKEQD |
8 | 6egcA | 0.16 | 0.14 | 4.81 | 0.88 | SPARKS-K | | LERSLREQEELAKRLKELLRELERLQREVRELLREIKELVEEIEKLAREQKYLVEELKRQ------GNEIIRELERSLREQEELAKRLKELLRELERLQREGS----SDEDVRELLRE |
9 | 4p1nA | 0.10 | 0.10 | 3.73 | 1.10 | FFAS-3D | | ITPFVESLSAKAFVMYSFAEMKFSQAPELKKLCMESLLLYLKSLTILASSMKLTSKWWYENESKNCTLKLNILVQWIRDRFNECLDKAEFLRLKLHTLIYDRALDISRNAARLEME-- |
10 | 6f1tX2 | 0.21 | 0.16 | 5.12 | 0.50 | HHpred | | --QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG----------HDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGG--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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