Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | EVLINKLRSIEYENKSNEKLIDCILYEVERQQHWVFRPILRLLFDMIILLIVFNDLLFRLIKRNYYICIILITTYIMYKFF |
1 | 5mqfT | 0.15 | 0.15 | 4.98 | 0.83 | SPARKS-K | | EALKKSINGLINKV--NISNISIIIQELLQENVRGRGLLSRSVLQAQSAFTHVYAALVAIINSKFPQIGELILKRLILNFR |
2 | 4hkrA | 0.14 | 0.14 | 4.63 | 0.74 | FFAS-3D | | QLSRAKLKASSKTSALLSGF--AMVAMVEVQMLIAFAICTTLLVAVHMLALMISTCILWYIETAWAFSTLLGLILFLLEI- |
3 | 6dlcA | 0.26 | 0.15 | 4.57 | 0.21 | HHpred | | -KHIKQLRDILSENPEDERVKDAID-LSERS-VRIVKTVIKIFEDSVRK-------------------------------- |
4 | 6b87A | 0.16 | 0.16 | 5.33 | 0.85 | MUSTER | | LVLAIFLLALLIVLLWLLQQLKELLRELERLQREDVRELLREIKELVENIVYLVIIIMVLVLVIIALAVTQKYLVEELKRQ |
5 | 4u8yA | 0.09 | 0.09 | 3.33 | 0.65 | CNFpred | | PFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAFSINTLTMFGMVLAIGLLVDNAIVVVE |
6 | 1vt4I3 | 0.11 | 0.10 | 3.58 | 0.50 | HHsearch-2 | | LDFRFLEQKIRHDSTATLQQLKFYKPYICDNDPKYE----RLVNAILDFLPKI---EENLICSKYTDLLRIALMAEDEAIF |
7 | 5ezmA3 | 0.06 | 0.06 | 2.67 | 0.69 | Neff-PPAS | | RSWGKQLIGMAIVAACGLLASPVVATLNANIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFT |
8 | 3tbiA | 0.14 | 0.11 | 3.81 | 0.58 | HHsearch | | KLLDQEGFIIEKV-EEFGSYLEATTAFLEENSIP-ETQFAKFIPSGIIEKIQSEAIDENLLRPSVVRC------------- |
9 | 6dm9A | 0.16 | 0.15 | 4.93 | 0.74 | SP3 | | EELLRENIELAKEHIEIMREILELLQKMEE----LLEKARGADEDVAKTIKELLRRLKEIIERNQRIAKEHEYIARERS-- |
10 | 5cwqA1 | 0.09 | 0.09 | 3.33 | 0.51 | PROSPECTOR2 | | EELERESEEAERRLQEARKRSEEARERCERGNSEEAERASEKAQRVLEEARKVSEEVLALALIAIALAVLALAEVACCRGN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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