>PF05782 (563 residues) MGTMSRAALVLACLAVTSVASEGGSESPGQRELGPETLTYHIQEVGYAAPPSPPRTRALP MDHPDTHQRGSDFEGQGEVQPPRSLEAIPIQEEELPPPQLPVENKVDPHFPQEAIPLQEE LPPPQDPVEQKEIEPSFLHQEEMTFPSKQREEKPAPFMDRSSPEPESWNPALHCQQGRSR GGWGHRLDGFPPGRPSPDNLDQICLPNRQHVVYGPWNLPQSGFSHLTRQGETLNLLETGY SRCCRCHSHTNRLDCAKLVWEDAMTRFCEAEFSVKTRPHWCCKQQGEARFSCFQEEAPRP HYQLRACPSHQPGISSGPELPFPPGVPTLDNVKNICHLRRFRSVPRNLPATDPIQRQLQA LTRLEGEFQRCCRQGNNHTCTWKAWEDALDGYCDQEQSVKTHHHSCCHYPPSPVRDECFA RRAPYPNYDRDILTLDLSRVTPNLMGHLCGNGRVLSKHKQIPGLIRNMTAHCCNLPFPEQ ACCAEEEKLAFIEDLCGPRHNFWRDSALCCNLNPGDEQTNCFNTYYLRNVALVAGDSGDD KGQGKQGQVXGRSISPTPEPKEE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MGTMSRAALVLACLAVTSVASEGGSESPGQRELGPETLTYHIQEVGYAAPPSPPRTRALPMDHPDTHQRGSDFEGQGEVQPPRSLEAIPIQEEELPPPQLPVENKVDPHFPQEAIPLQEELPPPQDPVEQKEIEPSFLHQEEMTFPSKQREEKPAPFMDRSSPEPESWNPALHCQQGRSRGGWGHRLDGFPPGRPSPDNLDQICLPNRQHVVYGPWNLPQSGFSHLTRQGETLNLLETGYSRCCRCHSHTNRLDCAKLVWEDAMTRFCEAEFSVKTRPHWCCKQQGEARFSCFQEEAPRPHYQLRACPSHQPGISSGPELPFPPGVPTLDNVKNICHLRRFRSVPRNLPATDPIQRQLQALTRLEGEFQRCCRQGNNHTCTWKAWEDALDGYCDQEQSVKTHHHSCCHYPPSPVRDECFARRAPYPNYDRDILTLDLSRVTPNLMGHLCGNGRVLSKHKQIPGLIRNMTAHCCNLPFPEQACCAEEEKLAFIEDLCGPRHNFWRDSALCCNLNPGDEQTNCFNTYYLRNVALVAGDSGDDKGQGKQGQVXGRSISPTPEPKEE | |||||||||||||||||||
1 | 5yfpE | 0.06 | 0.06 | 2.49 | 1.07 | SPARKS-K | TAIKKKQNYIQSVELIRRYNDFYSMGKSDI----VEQLRLSKNWKLNLKSVKLMKNLLILSSKLETSSIPKNFNAYRENNFTKLNEIAIILNN--------FNGG------VNVIQSFINQHDYFIFIKNVKF---KEQLIDFENHSVIIETSMQNLINDVETVIKNESKIVKRVFEEKATHVIQLFIQRVFAQKIEPRFEVLLRNSLSISN---LAYVRILHGLFTLFGKFTKSLIDYFQLL-EIDDSNQILTTLEQCFADLFSHYLYDRSKYFGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTA------SDIDN------------SPNSPANYSLNDVDSMLKCVVESTARVMELIPNKAHLYILEILKIMFLGI--VDSYMEIALEVAYWKICKVDINK--TAGVVNLNFLKFISMSTEIISIKSIFLPLLNNSPEIKAQIEMTNSQIQKMEILINIILQETITVISTKFSAILCKQ---KKKDFVPKSQ--ELLDQDTLPAIEIVNILNLIFEQSSKFLKGKNLQTFLTLIGEELYGLLLSHY- | |||||||||||||
2 | 2nbiA | 0.16 | 0.13 | 4.42 | 0.98 | MUSTER | ------------------------QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGR--PDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNN--LGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVIT-----------------------SPAPSSQPSQCAEVIEQCPIDE-CFLPYGDSSRPLD-CTDPAVNRPDC---VLPTPQINCPACCAFECRPDNPMFTPSPDGSPP------IC-------SPTMMPSPEPSSQPSDCGEVIEEPIDAC-DSARPPDCTAVG-RPDCNVL---PFPNNIGCPSCCPFECSPDN----PMFTPSPDGSPPNCSPTMAVTVPLTPAPSSAPTRQPSSQPSQPSECADVLELCCFLPFDDSSR----------PPDCTDPSVNRPD----CDKLSTAIDFTC--------TCCPTQCRPDNPSPDGSPPVCSPTMMPSPLPSPT | |||||||||||||
3 | 1kw2A | 0.16 | 0.09 | 2.91 | 1.29 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GR--DYEKNKVCKEFSHLGKEDSRKFPSGTFEQVSQLVKEVVSL---TEACCA---EGADPDCYDTRTSALSAKSCESPFPVHPGTAECCTKEGLERKLCMAALKHQPQEFPTYVEPTNDEICEAFRKDYG--QAPLSLLVSYCSQYAAYGEKQKVPTAD-LEDVLPLAEDITNILSKCC-ESASEDCMAKELPEHTVKLCDNLSTKNSKFEDCCQEKTAMDVFVCTYFMPAAQLPELPDVELPTN-------KDVCDPGNELSRRTHLPEVTLKSLGECCDVEDSTT--CFNAKGPLLGQELCADYSENTFTESNCCSINSPPL---YCD----SEIDAELKN--------------------------- | |||||||||||||
4 | 5mqfM | 0.06 | 0.06 | 2.54 | 1.70 | Neff-PPAS | -PESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKRDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPRINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQV------DDLASVWCQCGELELRHE---------NYDEALRLLRKATALPARRAEYFDGSEPVQNRVYDLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLF-KWPNVSDIWSTYLTKFIARYGGRKLDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTG-----AFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQV-- | |||||||||||||
5 | 1n5uA | 0.18 | 0.10 | 3.25 | 3.80 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEENFKALVL------IAFAQYLQQCPFEDHVKLVNEVT---EFAKTCVAD---ESAENCDKSLHTLFGDKLCTVATLRETYMADCCAKQEPERNECFLQHKDDNRLVRPMCTAFYAPQAADKAACLLPKKASSAKQRLKCASRAFKAVSQRFPKAAEVSKLVTDLTK---VHTECCHG-DLLECADD-RADLAKYICENQDSISSKLKECCEK-PLLEKSHCIAEVENDESLAADFVEKPLVEEPQNLIKQNCELFEQLGKVPQVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEPVSDRVTKCCTES-LVNRRPCFSALEVDE---------------------------------- | |||||||||||||
6 | 1n5uA | 0.18 | 0.11 | 3.54 | 3.83 | HHsearch-2 | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AH------KSEVAHRFKDL-----GEENFKALVLI------AFAQYLQQCPFEDHVKLVNEVT---EFAKTCVAD---ESAENCDKSLHTLFGDKLCTVATLRETYMADCCAKQEPERNECFLQHKDDNPNLPRMCTAFYAPQAADKAACLLPKKASSAKQRLKCASRAFKAVSQRFPKAAEVSKLVTDLTK---VHTECCHG-DLLECADD-RADLAKYICENQDSISSKLKECCEK-PLLEKSHCIAEVENDESLAADFVEKPLVEEPQNLIKQNCELFEQLGEYKKVPRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEPVSDRVTKCCTES-LVNRRPCFSALE-----------VDET-------YVPKEFNAETFHADI | |||||||||||||
7 | 2nbiA | 0.12 | 0.10 | 3.55 | 1.69 | PROSPECTOR2 | QPS-----------------DLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQP-----STPTVITSPAPSSQPSQCAEVI---------------EQCPIDECFLP--------------------YGDSSRPLDCTDPAVNRPDCTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPT---------MMPSPEPSSQPSDCGEVIEE----CPIDACFLPKSDSARPPDCTAVGRPDCN----VLPFPNNIGCPSCCPFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCCTDPSVNRPDCD------------KLSTAIDFTCPTCCPTQCRP------------------DNPMFSPSPDGSPPVCSPTMMPSPLPPTE | |||||||||||||
8 | 1n5uA | 0.17 | 0.10 | 3.39 | 5.66 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AHKSEVA----------HRFKD-----LGEENFKALVLI------AFAQYLQQCPFEDHVKLVNEVT---EFAKTCVAD---ESAENCDKSLHTLFGDKLCTVATLRETYMADCCAKQEPERNECFLQHKDDNRLVRPMCTAFYAPQAADKAACLLPKKASSAKQRLKCASRAFKAVSQRFPKAAEVSKLVTDLTK---VHTECCHG-DLLECADD-RADLAKYICENQDSISSKLKECCEK-PLLEKSHCIAEVENDESLAADFVEKPLVEEPQNLIKQNCELFEQLGKVPQVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEPVSDRVTKCCTES-LVNRRPCFSALEVD-------ETYVP-----------KEFNAETFHAD- | |||||||||||||
9 | 1n5uA | 0.18 | 0.09 | 2.95 | 2.24 | SAM | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLQQCPFEDHVKLVNEVT---EFAKTCVA---DESAENCDKSLHTLFGDKLCTVATLRETYMADCCAKQEPERNECFLQHKDDNPNLPR---------AADKAACLLPKKASSAKQRLKCASRAFKRLSQRFPKAAEV---SKLVTDLTKVHTECCHG-DLLECADD-RADLAKYICENQDSISSKLKECCEK-PLLEKSHCIAEVENDEADLPSLAA--------NLIKQNCELFEQLGKVPQVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEPVSDRVTKCCTESL-VNRRPCFSALEVD----------------------------------- | |||||||||||||
10 | 4btgA | 0.10 | 0.09 | 3.33 | 1.04 | SPARKS-K | PNFYALVDCVRASDLLTALSSVKMLQATFKAKLAPALISQHLANAATTAFERSRGNFDANLWSPSTPKELDPSARLRNTNGIDQRGRAEFSDEELSSTIIPWFMSEVSPFKLRPINETTSYSAIDHMGQPSHVDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATAPIGNTFAVSAFVKNYEAVSQRGTVNSNGAEMTL-----------GFP-SVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVA-----AEQGSYLVWNVRTELRIPVGYNAIEGGSIRTPEP----LEAIAYNKPIQPSEVLQAKVLDLANHTTSI----------------HIWPWH----------EASTEFAYEDAYSVTIRNKRKEFELLGLRILKPTVAHAIIQYSWFVEDDRTLAAARRTSRDDAEKLAIDGNAVTLLRKIEMITTGIGASAVHLAQSRIVDQMAGRGLI--------DDSSDLHVGINRHRIRIWAGLAVLQGLLSRSKVLGDSNALGMVVA--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |