Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MEFIPVDVSTQATSKSLLPLVIALTVCVVSIITILCISEFLVYTNVLVLTLILYVLLWLLLTTPLQFYLLTLSLCFLPALCVHQYILQTQE |
1 | 5xamA | 0.14 | 0.14 | 4.86 | 1.01 | SPARKS-K | | PIKIVTAAERSIGADAIRSGAIAALVGIGLVFVMLFAYYGLWFGLVGALGLLFSSIIILGILGGIAGLVLTIGAAVDGNVISFERIKEELA |
2 | 6f2dG | 0.22 | 0.21 | 6.59 | 1.02 | MUSTER | | MT--PESVMMMGTEAMKVALALAAPLLLVALITGLIISILQAATQIMTLSFIPKIVAVFIAIIVAGPWMLNLLLDYVRTLFSNLPYIIG-- |
3 | 3jbrE | 0.10 | 0.10 | 3.63 | 1.00 | SPARKS-K | | ----MSPTEAPKVRVTLFCILVGIVLAMTAVVSYSISAAAISVFSLGFLIMGTICALMYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIY |
4 | 6m9tA2 | 0.18 | 0.15 | 5.00 | 0.80 | FFAS-3D | | ----------GSVSVAFPITMLLTGFVGNALAMLLVSRSYRKSFLLCIGWLALTDLVGQLLTTPTMTVFGLSSLFIASAMAVERALA---- |
5 | 4phuA | 0.21 | 0.18 | 5.59 | 0.23 | HHpred | | ------------PPQLSFGYVAAFALGFPLYALNLGCSDLLL-TVSLPLKAVEALAAWCPVFAVAHFAPLYAGGGFLAALSAARYLGAAF- |
6 | 5v4sA1 | 0.19 | 0.19 | 6.01 | 0.98 | MUSTER | | WDIL-VFICI--WASLESPLRILLLTCIYFFIDFVFALDILWNGSWFIIDLIAALPLEYATTTIFYLYLLLGVTRILKVFRISDILQRINL |
7 | 5xtcr | 0.13 | 0.11 | 3.80 | 0.76 | CNFpred | | ---------------AYPFLVLSLWGMIMTSSICLDLKSLIAYSSISHMALVVTAILIQTSFTGAVILMIAHGLTSSLLFCLANSNYERTH |
8 | 5tj5A | 0.23 | 0.22 | 6.88 | 0.58 | HHsearch-2 | | MFLSPGTIPHQAKVQVFL-LLMA----LVCIPWLLLVKDIMIHQVIHCSHTASYLRLWALSLAHAQWFALTCASAMLHSLRLHWVESMSKP |
9 | 4q2eA1 | 0.07 | 0.07 | 2.66 | 0.93 | Neff-PPAS | | -----------EMKERDARFFYVILLALYPVLYGLVFEEPTQPLSILFITGVVFSLITDPSQVFKTVAAFSIALIYVTFFLSFFLPIYRDF |
10 | 3bz2T | 0.12 | 0.04 | 1.54 | 0.35 | HHsearch | | -------------------------------------METITYVFIFACIIALFFFAIFFREPP-RI----------T----------KK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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