Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | PLVFIFAWLQASEKHLAKYAEFYLDQGFEVLCVHITPWQLVWPVNGSQKVAADVVKFLANNELPEGIVIHGFSVGGYLWGECLVKLQADPSGKRVLEKIRGQVWDSLADITEIPVGVPHAVLPHNPTLQGVLRNYINYHMKLFHEEATQYYVKCTRLFHYEPAPCPALLLVSKTDPVGTEKANNRLRGIWESVGVQTSLKCWDKSPHVGHFHKHRDEYIELLVAH |
1 | 2oclA | 0.14 | 0.13 | 4.53 | 1.22 | SPARKS-K | | AVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGPDRDFPADFFERDAKDAVDLMKALKFKK-VSLLGWADGGITALIAAAKY---------PSYIHKMVIWGANADSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG----SRLHLMPEGKH-NLHLRFADEFNKLAEDF |
2 | 5g59A | 0.16 | 0.14 | 4.75 | 1.66 | FFAS-3D | | -VIPLHGYTSSAEHYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYKEILDLKAGVKWLKDNYKSKRIGVIGFSMGALVAIRGLSE----------VKEICCGVADSPPIYLDKTGARGMKYFAKLPEWLYSFVKPFSELFSGGR--------PINVLNYTNSIKKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELW-VTDAPHVRTIQVFPEEWKSRVGEF |
3 | 2oclA | 0.14 | 0.13 | 4.52 | 1.59 | HHpred | | AVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDFFERDAKDAVDLMKAL-KFKKVSLLGWADGGITALIAAAK---------YPSYIHKMVIWGANAYVTDEDMYEGIVSKWSERTRKPLEALYGY--DYFAR-TCEKWDGIRQFHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK----GSRLHLMPEGKHNLHL-RFADEFNKLAEDF |
4 | 5g59A | 0.17 | 0.15 | 4.99 | 1.23 | MUSTER | | KTVIPLGYTSSAEHYMRPVIEFLLKEGYNVLAFDFRAGKYTTVGDKEILDLKAGVKWLKDNYPSKRIGVIGFSMGALVAIRGLSEV----------KEICCGVADSPPYLDKTGARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNS---------IKKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELWVTDA-PHVRTIQVFPEEWKSRVGEF |
5 | 5g59A | 0.17 | 0.15 | 4.99 | 1.35 | CNFpred | | TVIPLHGYTSSAEHYMRPVIEFLLKEGYNVLAFDFRAGKYTTVGDKEILDLKAGVKWLKDNYKSKRIGVIGFSMGALVAIRGLSEV----------KEICCGVADSPPIYLTGARGMKYFAKL-PEWLYSFVKPFSELFSGGRPINVLNYTNSI---------KKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELWVTDA-PHVRTIQVFPEEWKSRVGEF |
6 | 5g59A | 0.16 | 0.14 | 4.74 | 0.43 | HHsearch-2 | | TVIPLHGYTSSRWAYMRPVIEFLLKEGYNVLAFDFRAHGKSGGTVGDILDLKAGVKWLKDNYKSKRIGVIGFSMGALVAIRGLSE----------VKEICCGVADSPPILDKTGAGMKYFAKLPEWLYS-FVKPFSELF---SGGRP-------INVLYTNSIKKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELWVTDA-PHVRTIQVFPEEWKSRVGEF |
7 | 3dkrA | 0.12 | 0.12 | 4.06 | 1.44 | Neff-PPAS | | GVVLLHAYT-GSPNDMNFMARALQRSGYGVYVPLFSDILTKGNPDIWWAESSAAVAHMTAK--YAKVFVFGLSLGGIFAMKALETLPG----------ITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLVKQPTFIGQAGQDELVDGRLAYQLRDALI-NAARVDFHWYDDAKHVITVNSAHHALEEDVIAF |
8 | 5g59A | 0.16 | 0.14 | 4.74 | 0.70 | HHsearch | | TVIPLHGYTSSRWAYMRPVIEFLLKEGYNVLAFDFRAHGKSGTTVGDILDLKAGVKWLKDNYKSKRIGVIGFSMGALVAIRGLSE----------VKEICCGVADSPPILDKTGAGMKYFAKLPEWLY-SFVKPFSEL---FSGGRP-------INVLYTNSIKKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELWVTDA-PHVRTIQVFPEEWKSRVGE- |
9 | 5g59A | 0.16 | 0.15 | 4.87 | 1.49 | PROSPECTOR2 | | HVIPLHGYTSSAEHYMRPVIEFLLKEGYNVLAFDFRGGKYTTVGDKEILDLKAGVKWLKDNYPSKRIGVIGFSMGALVAIRGLSE----------VKEICCGVADSPPYLDKTGARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNS---------IKKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELWVTDA-PHVRTIQVFPEEWKSRVGEF |
10 | 5g59A | 0.16 | 0.14 | 4.74 | 1.66 | SAM | | -VIPLHGYTSSRWAYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTILDLKAGVKWLKDNYKSKRIGVIGFSMGALVAIRGLSE----------VKEICCGVADSPPYLDKTGARMKYFAKLPEWLYSFV-KPFSEL---FSGGR-------INVLNYTNSIKKPLFLIIGRRDTLVKVEEVQEFYERNKHVNPNVELWVTDA-PHVRTIQVFPEEWKSRVGEF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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