Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MEAWVRFSAQSAAKERVFRAAQYACTLLGYTMQKNGASAELLARIKQLEAHMSLGRKLFRLGNSAEALEAAKRAIHLSDMVLRFCITVAHLNRAMYFACDNILWAGKTGLVPHADQEKWSQRSFRYYLFALIMNLSRDAYEIRLLMEREASGKRPKGTENGHQAQVDNGLQHLALRLRIQLRLLGHVLRSNPPLLLDLVKNACDIFIPLDKLGLYKTSPGFVGLCGLTSSILSILTI |
1 | 5mz61 | 0.11 | 0.11 | 3.78 | 0.81 | SPARKS-K | | MSAMILNLRVALKSASFFRVLQTTNTLAYYSSIEEAGSEKNAKLMRVSCVNLLNVCTIYPLHSSFAAEYMMSYAIHSDERGMSSQVLMHNIIQNEIFGMCVIRWLTKKLDSKESADEDTMEIFNNALKIVRTTDMILAVTQLGRQLEFPMECNYSWMRPTIDK-----------ERFEKVRLAMRNEMNHYGHILYREWRCRLFAYVGRTS-----RDPWEAAYAWAESTQIGARNA |
2 | 1fioA | 0.11 | 0.08 | 2.92 | 1.08 | FFAS-3D | | MHDFVGFMNKISQINRDLDKYDHTINQVDSLHKRLLTESHLRHSLDNFVAQATDLQFKLK-----NEIKSAQRDGIHDTNKQAQAENSR---------------------------QRFLKLIQD--YRIVDSNYKEENKE--QAKRQYMIIQPEATEDEVEAAISDVGGQQIFSQALLEAKTALAEVQARHQELLKLEKSMAEL----------------TQLFNDMEELV----- |
3 | 3c18A2 | 0.15 | 0.08 | 2.85 | 0.21 | HHpred | | -----------PETERCLQ-SL---------------------SFAKLLRRFQDGRNLFSRGNYYDAYTHVHHALHHAHPEVVVWEQARLDDPDVYKLYEQLLL-------SEETEQRIHLAGLEHLLQSKVLSGGKYLFEVR-----------ERDRPTHE-LEESRL-TELKV---DLGSLVDFFIRKG---------------------------------------------- |
4 | 1st6A | 0.10 | 0.10 | 3.62 | 0.84 | MUSTER | | MNQAKGWLRDPNAGEQAIRQILDEAGKAGELCKERREILGTCKTLGQMTDQLADLRARGQGATAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANV |
5 | 5y50A | 0.13 | 0.12 | 4.09 | 0.80 | CNFpred | | TAIAVSFCSVT-GFSVVFGLASALETLCGQANGAK-QYEKLGVHTYTGIVSLFLVCIPLSL--LWTYIGDILSLIGQAQEAGKFATWLIPALFGYATLQPLVRFFQAQSLI--LPLVMSSVSS-LGAAIAIGVSYWLNVTVLGLYMTFSSSCSKSRAT-----------------ISMSLFEGMGEFFRFGIPSASMICLEWWSFEFLVLLSGILPNPKLEASVLSVCLSTQSSLYQ |
6 | 3jacA | 0.12 | 0.11 | 3.76 | 0.43 | HHsearch-2 | | IDRALYLRKTVTERMNAVAQLWYFVKCIYFALIRCGYPTRILG--NFLTKKYNHNLFLFQGFRLVPFLVELRAVMWTDTTLSNWMC-VEDIYANIFIICSEKKYPQPKGQKK----KKIVKYGMG---GLIILFLIAIIWFPLLFMSL---IRSVV-GVVNQPIDVPSAQPSIV---PFTPQAYEELSQQFDPLAMQFISQPEDIVISSGALWR--ISPPSRA--QMKQELYNGADI |
7 | 2yfaA | 0.09 | 0.08 | 3.21 | 0.91 | Neff-PPAS | | --------SHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADLSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAE---------NSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRVANITTSRAEMTVQGADIVKRSDA |
8 | 1vt4I3 | 0.14 | 0.10 | 3.31 | 0.88 | HHsearch | | EYALHR---SIVDHYNIPKTFPYLDQYFYS---------HIGHHLKNIEHRMTLFRMVFLDFR---FLEQKIRH--DSTAWNASGSILNTLQQLKFYKPYI---------CD-N-DPKYER---------LVNAILDFLPKIEENCSKYTDLRIAL-----------M---A--EDEAIFEEAHKQVQ--RGGGG-----------------GGGGGGGGGGGGGGGGGGGGGGGG- |
9 | 5cwmA | 0.12 | 0.11 | 3.70 | 0.76 | SP3 | | VKEAEELLRQEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAGSEEALERALRVAEAARLAKRVLELAEKQPEVALRAVELVVRVAE---LLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER-------------------------------- |
10 | 4ci6B2 | 0.07 | 0.07 | 2.81 | 0.91 | PROSPECTOR2 | | VTHLSSAATKQLDMGVVLSDLDTMLVALDKAEREGGVDKDQLKSFNSLILKTYSVIGAYILSIVEPSLQRIQKHLDQTHSFSD-IGSLMRAHKHLETLLEVLVTLSQQGQPVSSETYSFLNREAKVTLSQQLNTLQQQQESAKAQLSILINRSGSDSTRPVVKFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTADSIPL---LIQLGRSSLMDEHLVLTTIAERLNRLERM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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