Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MGCCSGRCTLIFICTLQLVLALERQVFDFLGYQWAPILANFFHIIIVILGLFGTIQYRPRYIVVYTVWAALWVAWNIFIICFYLNVGGLSKDSDLLTFNISAHHSWWSEHGPGCVRREMPQASGVHTTESHSYITVMGCLMDYQYIEVMHSGTQILVALLGFVYACYVVSAITEEEDSFDFIGGFDPFPLYHVNEKPSHLLLKPMYPS |
1 | 3ixzA4 | 0.08 | 0.07 | 2.88 | 0.94 | SPARKS-K | | GRLIFDNLKKSIAYTLTKNIPELTPYLIYILGCITILFIELCTDIFPSVSLAYIMHLRPRVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLR-----------PQWENHHLQDLQDSYGQEWTFGQRLYQQYTC----YTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPN |
2 | 4jq6A | 0.13 | 0.08 | 2.66 | 0.77 | FFAS-3D | | ----KWKTSLTVAGLVTGVAFWHYLYMTVFRYIWVPLQIIEFSLVMLIGGFIGEAGLGDVVYIIYEIFWIVTVGWAIYPIGYAWGYFG--------------------------------------------------DGLNEDALNIVYNLADLINKAAFGLAIWAAAMKDKETS-------------------------------- |
3 | 5tcxA | 0.12 | 0.09 | 3.23 | 0.23 | HHpred | | -TKS-IKYLLFVFNFVFWLAGGVILGVTFYVGIYILIAVGAVMMFVGFLG-YGAIQQ---LLGTFFTCLVILFACEVAAGIWGVNKDQIAKDQALQQAGSSTLTALTTSKNNLCPSGSNI----------ISNLFKEDCHQKIDDFYLIGAIVVAVIMIFEMILSMVLSSGIRN---------------------------------- |
4 | 6h7dA2 | 0.09 | 0.09 | 3.25 | 0.66 | MUSTER | | FCSA---PFFQQITGINVIMFYAPVLFKTLGDDAALMSAVITGVVNMLSTFVSIY--RRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWILAFICVYV-FAWSWGPLGWLVPSEICPLE-QAINVSVNMFFTFTMLCHMKFGLFYFFASMVAIMTVFIYFLLIEEMGRV-WKQHWFWKKYIPEDAIIGG--------- |
5 | 3rkoB | 0.09 | 0.05 | 1.81 | 0.99 | CNFpred | | ------SALIHAATMVTAGVYLIARTHGLFLPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ-------------------------------------------------------------AWDAAIFHLMTHAFFKALLFLASGSVILACH----------------------------------- |
6 | 5ireA | 0.17 | 0.06 | 2.06 | 0.48 | HHsearch-2 | | SGSTIGKAFEATVRGAKRMAVLGDGALNSLGKGIHQIFGAAFK------SLFGGMSWFSQILIGT---LLMWLGLNTGGVLIFLSTA------------------------------------------------------------------------------------------------------------------------- |
7 | 6h7dA2 | 0.10 | 0.10 | 3.56 | 0.75 | Neff-PPAS | | LIFCSAIPFFQQITGINVIMFYAPVLFKTLGFLMSAVITGVVNMLSTFVSIYAVDRYRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICPLEVNMFFTFLIGQFFLTMLCHMKFGLFYFFASMVAIMTVFIYFLLPEPIEEMGRVWKQHWFWKKYIPEDAIIGG------- |
8 | 2q2kA | 0.29 | 0.06 | 1.90 | 0.34 | HHsearch | | ---KETKHL------LKIKKEDYPQIFDFLENV--PRGTKTAHIREALR----------RYIEE---------------------IG------------------------------------------------------------------------------------------------------------------------- |
9 | 5nj3A | 0.10 | 0.08 | 3.04 | 0.69 | SP3 | | LFFLTTNQCFSSVSAVVEKKLFIHEYISVSSYFLGKLLSDLLPMRMLPSIIFTCIVYKPKADAFFVMMFTLMMVAYSASSMALA-IAAGQSVVSLVNLTIASWLSWFLGQNFCPGLNATGNNPCNYATCTEEYLVKQG--IDLSPWGLWKNHVALACMIVIFLTIAYLKLLFLKKYS------------------------------- |
10 | 1u19A | 0.10 | 0.10 | 3.53 | 0.78 | PROSPECTOR2 | | MYYLAEPWQFSMLAAYFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIAFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNEGQLVFTVKEAAAQQQESA-------------TTQKAEKEVTRMVIIMVIAFLICWAFYIFTHQGSDFGLCCGKNPLGDDEASTTVSKTETSQVAPA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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