>PF05633 (382 residues) MPATDFQGSFGRSLLSLRRDQVDSSTVVSGSSSHHEPSTMEVELDSFQRQVAEKFIDLNA SSNDLLSLEWIGKLLDSFLCCQEEFRAIVFNHRSQISKSPMDRLISDYFERSIKALDVCN AIRDGIEQIRQWEKLADIVISALDSHRPIGEGQLRRAKKALIDLAIGMLDEKDHPSGTNL AHRNRSFGRVKDSHHRSIGHFRSLSWSVSRSWSASKQLQALASNLATPRPNDVVASNGLA VPVYTMTSVLLFVMWVLVAAIPCQDRGLQVNFFVPRHFQWAAPVMSLHDKIVEESKRRDR KNCCGLLKEIDRIEKSSRLMNELIDSIHFPLNDDKEVEVKQRVDELVQVREALRNGLDPF ERKVREVFHRIVRSRTESLDSL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MPATDFQGSFGRSLLSLRRDQVDSSTVVSGSSSHHEPSTMEVELDSFQRQVAEKFIDLNASSNDLLSLEWIGKLLDSFLCCQEEFRAIVFNHRSQISKSPMDRLISDYFERSIKALDVCNAIRDGIEQIRQWEKLADIVISALDSHRPIGEGQLRRAKKALIDLAIGMLDEKDHPSGTNLAHRNRSFGRVKDSHHRSIGHFRSLSWSVSRSWSASKQLQALASNLATPRPNDVVASNGLAVPVYTMTSVLLFVMWVLVAAIPCQDRGLQVNFFVPRHFQWAAPVMSLHDKIVEESKRRDRKNCCGLLKEIDRIEKSSRLMNELIDSIHFPLNDDKEVEVKQRVDELVQVREALRNGLDPFERKVREVFHRIVRSRTESLDSL | |||||||||||||||||||
1 | 5j1iA | 0.08 | 0.07 | 2.61 | 1.24 | FFAS-3D | ----------------------------------------ISELKDIRLQLEARTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVA------RLSAEAEKVLAAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISL----VIRGTQGAEEVLRAHEEQLKEAQAVPATPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGR----------QLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIGEKVEECQRFAKQNAIKDYELQLVTYKAGSESVIQEYVDLRTHYSELTTLTSQYIKFISET- | |||||||||||||
2 | 5j1iA | 0.07 | 0.06 | 2.54 | 1.07 | Neff-PPAS | ----------------------------------SRCQRCISELKDIRLQLEACETRTVHRLRLPLPARECAQRIAEQQKAQAEVEGLGKGVARLSAEPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEA------------------------QAVPATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRKDYELQLVTYKAQLEKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISET- | |||||||||||||
3 | 5k7vA | 0.14 | 0.09 | 3.22 | 0.84 | SPARKS-K | -------------------------------IEEVVAEMIDILAESSKKSIEELARAADNKTT----EKAVAEAIEEIARLATAAIQLIEALAKNLASEFMARAISAIAELAKKAIEAIYRLARAIAAIANLAVTAILAIAALASNHTTESAIAELAKKAIEAIYRLADNHT--------------------------------------------------------------TDKFMAAAIEAIALLATLAILAIALLASNHTTE-------EFMAKAISAIAELAKKAIEAIYRLADNHTSYIEKAIEAIEKIARKAIKAIEMLNIT-TEEYKEKAKSAIDEIREKAKEAIKRLEDNRT-------------------- | |||||||||||||
4 | 5i6jA | 0.08 | 0.07 | 2.86 | 1.22 | FFAS-3D | -----------------KKDKEIIAE-------------YDTQVKEIRAQLTEQMKCLDQQCEL--RVQLLQDLQDFFAEIEMDYSRNLEKLAERFNVLSPVNCWNLLLNQVKRESRIIPRFVQVSEDSGRLFKKSKEVGQQLQDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQEVKKIEKMKEKRQAKYTENKLKAIKARNEYLLALEATNASVFKYYIHDLSDLIDQASLNRALRTFLSAELNLEQSKHEGLDAIENAVENASQLCAQQPVQSELVQRCQQLQSRLST--------LKIENEEVKKTMEATLQTIQDIVTVEDFDVSDCFRANQQETEQFYFTKMKEYLEGRNLITKLQAKHDLLQKTL---- | |||||||||||||
5 | 6b3oA | 0.09 | 0.03 | 1.10 | 0.31 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEFIQTRSPKVTIDC--AA----FVCGD-NTAVEYGSFCVNVNAILNEV--------------------------------MIASAFNN-------ALGA--------IQDGFDATNSALGKIQSVVNA--------NAEALNNLLNQLSNRFGAISASLQEILTRLEAVIDRLINGRLTALNAY | |||||||||||||
6 | 1st6A | 0.08 | 0.08 | 3.25 | 0.92 | MUSTER | LTHQEHRVMLVNSMNTVKELSAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAEINEIIRQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLPGDAGEQAIRQILDEAGKAGEERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAAKKIDAAQNWLADPNGGSEGEEHIRGIMSELCEEPKERDDILRSLGEISALGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDVGQAAIRGLVAEGRRLANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGES-PQARAIAAQLQDSLKDLKARMEAMTQEVSDVFSDT----TTPIKLL | |||||||||||||
7 | 1tr2A | 0.12 | 0.10 | 3.69 | 0.97 | CNFpred | ------------------------------------------EARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDD-RGVGQAAIRGLVAEGHRLANVRQDLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLA-DAPNREEVFDERAANFE---NHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT-----KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVEEDPKFREAVKAASDELSKTISPMVMDA | |||||||||||||
8 | 6f1tX2 | 0.11 | 0.02 | 0.76 | 0.43 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKREL-----EHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVR | |||||||||||||
9 | 6ek4A | 0.06 | 0.05 | 2.12 | 1.03 | Neff-PPAS | ---------------------------------VVYPEINVKTLSQAVKNIWRLSHQQKSGIEIIQKTLRISLYSRDLDEAARASVPQLQTVLRQLPPQDYFLTLTEIDTELEDPELDDETRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVSNV-------------VILERLESSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDVIRQYNISDLDKLDLANPKKELIKQAIKQGVEIAKKILGNISKGLK-----------YIELADARAKLDERINQINKD-CDDLKIQLKGVEQRIAGIEDVHQIDKERTTLLQAAKLEQAWNIFAKQLQNTIDGQQDLTKIIHKQLDFLDDLALQYHSML | |||||||||||||
10 | 1lq7A | 0.18 | 0.03 | 1.02 | 0.56 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GS-----RVKALEEKVKALEEKVKALGG---GGRIEELKKKWEELKKKIEELGGGVKKVEEEVKKLEEEIKKL-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |