Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | CYRLGIWVRDKTAGIGTLTFYDENTGIFGALGHGITDIDTGELLKIENGKIMSARISEIEQGSKGSPGEIKGAFYETQDALGDITSNTEFGIYGKLYKKNLDNNKSKPLPVGFQEEVKEGKAYILTTINDNKVQKYEIEIVKAQNQPFPEQKSMIIRITDKKLLQKTGGIVQGMSGSPIIQDGKLIGAVTHVFVNDPTKGYGIYIDWML |
1 | 3stjA1 | 0.15 | 0.11 | 3.89 | 1.15 | MUSTER | | PAVVSVRVEGTFEGLGSGVIINASKG-----NHVINQAQK-ISIQLNDGREFDAKLIGSDD---------------------------QSDILLQIQNP----SKLTQIAIADSDKLRVGDFAVAVGNFGLGQTATSGIVSALGRSGLNLEGLENFIQTD-------ASINRGNSGGALLLNGELIGINTAILAPGGGSGFAIPSNMAR |
2 | 1gbeA | 0.13 | 0.11 | 3.81 | 1.31 | CNFpred | | NIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGT--------VNATARIGGA---------VVGTFAARVFP-GNDRAWVSLTSAQTLLPRVANG------SSFVTVRGSTEAAVG-AAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNA--------CAGRGDSGGSWITSGQAQGVMSGLNVQ-QRSSLFERLQPIL |
3 | 2sfaA | 0.12 | 0.11 | 3.68 | 1.51 | Neff-PPAS | | ---EAIYAAGGGRCSLGFNVRSSSGATYALTGHCTEI----------------ASTWYTNSGQTSLLGTRAGTSFPGND-YGLIRHSNASAADGRVYL-----YNGSYRDITGAGNAYVGQTVQRSGSTT-GLHSGRVTGLNATVNYGGGDIVSGLIQTN-------VCAEPGDSGGALFAGSTALGLTSGGSGNCRTGGTTFFQPVTE |
4 | 3stjA1 | 0.16 | 0.13 | 4.30 | 0.84 | SPARKS-K | | VLPAVVSVRVEGTGLGSGVIINASKGYVLTNNHVINQA-QKISIQLNDGREFDAKLIGSDD---------------------------QSDI-ALLQIQNP--SKLTQIAIADSDKLRVGFAVAVGNPFGLGQTATSGIVSALGRSGLEGLENF-IQTDAS--------INRGNSGGALLNNGELIGINTAILAGSVGIGFAIPSNMAR |
5 | 3stjA1 | 0.16 | 0.11 | 3.84 | 0.59 | FFAS-3D | | -------------GLGSGVIINASKGYVLTNNHVINQAQK-ISIQLNDGREFDAKLIG----------------SDDQSDIALLQIQ--------------NPSKLTQIAIADSDKLRVGDFAVAVGNPGQTATSGIVSALGRSGLNLEGLENFI--QTD-------ASINRGNSGGALLNNGELIGINTAILAPGGGSGFAIPSNM-- |
6 | 3stjA1 | 0.12 | 0.10 | 3.53 | 0.67 | HHpred | | VVSVRVEGTQPFEGLGSGVIINASKGYVLTNNHVINQAQK-ISIQLNDGREFDAKLIGSDDQ----------------SDIALLQIQNP---------S-----KLTQIAIADSDKLRVGDFAVAVGNFGLGQTATSGIVSALGRSGLNLEG-------LENFIQTDASINRGNSGGALLLNGELIGINTAILAPGVGIGFAIPSNMAR |
7 | 2sfaA | 0.14 | 0.11 | 3.95 | 1.15 | MUSTER | | -IAGGEAIYAAGGGRCSLFNVRSSSGATYALGHCTEIAS---TWYTNSG-------------QTSLLGTRAGTSFPGN--YGLIRHSNA-----SAADGRVYLYNGSYRDITGAGNAYVGQTVQRSGS-TTGLHSGRVTGLNATVNYGGGDIVSGLIQTN-------VCAEPGDSGGALFAGSTALGLTSGGSGNCRTGGTTFFQPEAL |
8 | 1gbaA | 0.13 | 0.11 | 3.67 | 1.31 | CNFpred | | -------------IVGGIEYSINN-ASLCSVGFSVTRGATKGFVTAGHCGTVNATARIG----GAVVGTFAARVFP-GNDRAWVSLTSAQTLLPRVANG------SSFVTVRGSTEAAVG-AAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNA--------CAGRGDSGGSWITSGQAQGVMSGANV--QRSSLFERLQPIL |
9 | 3stjA1 | 0.14 | 0.11 | 3.78 | 0.72 | HHsearch-2 | | PAVVSVRVEGPFEGLGSGVIINASKGYVLTNNHVINQAQK-ISIQLNDGREFDAKLIGSDDQ----------------SDIALLQIQNP---------S-----KLTQIAIADSDKLRVGDFAVAVGNPGLGQTATSGIVSALGRSNLEGLENF-I-QT-------DASINRGNSGGALLLNGELIGINTAILAPGVGIGFAIPSNMAR |
10 | 3wy8A | 0.11 | 0.10 | 3.64 | 1.40 | Neff-PPAS | | KHIGKIFFTLGGSYVCSGNSVTAANKSTVSTGHCLNEGPGAYA------TNFIFVPAYLNGAAPYGKWTAKALYAPTQWASNGNMQYD--TAFAVMNTLNGQKLADVVGSSGVQFNAARGLSYKSFGYAASPFNGESLKSCSGTATNDPYNPQFATQGIP-------CNMTGGSSGGPWFIGGYQNSVNSYGYGSNSSTMYGPYWGTVI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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