Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MEIRMRTRYDKNRRRDKGVPIECDCNAKVVVATSLDPVTTGKLFFSCPHEISDGPGQGCGFKRWWTVALCDEFDMIKEETTEMKKDLEAANKRVESQTEKIFLMEKKFETLEKKYESLNKYL |
1 | 5u6zA | 0.19 | 0.10 | 3.17 | 1.06 | HHsearch-2 | | NAQTAFWKSLL--K-GPPPPPNCKGSEPCVLRTVKAGPNCGRQFYVCARPEGHSPQARCNFFLWLT-------------------------------------------------------- |
2 | 5u6zA | 0.19 | 0.10 | 3.17 | 1.44 | HHsearch | | NAQTA--FWKSLLK-GPPPPPNCKGSEPCVLRTVKAGPNCGRQFYVCARPEGHNPQARCNFFLWLT-------------------------------------------------------- |
3 | 4wheA | 0.10 | 0.10 | 3.66 | 0.90 | SPARKS-K | | NANINALLEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQ |
4 | 4rsjA | 0.16 | 0.07 | 2.44 | 0.77 | FFAS-3D | | -------------------------------------------------------------------KLREKVESLRRRKEALEGELNSLKIELRSLENASFELRIKLSDEKKELELASKDL |
5 | 4kisA | 0.12 | 0.11 | 4.08 | 0.62 | HHpred | | --RMGKNNMNKESASLLNNLVVCSCGLGFVHRRKDTVSKYHYRYYSCKTYKHTHELEKCGNKIWRADKIIDRVNNYSFKLKIEHAKKKRLFDEVSELDSMMNDIDAQINYYEAQIEANEELK |
6 | 5mg8A | 0.12 | 0.11 | 4.03 | 0.87 | MUSTER | | ELPPASVNALNNFRLANGDPVLKTY-GSSIHLVFRSAYGDREITRRTDPLPSRSIYFS-------ENVEMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKER |
7 | 5xg2A | 0.22 | 0.10 | 3.10 | 0.59 | CNFpred | | --------------------------------------------------------------------VLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKAL |
8 | 4kisA | 0.11 | 0.11 | 4.10 | 0.65 | HHsearch-2 | | FSRMGKNNMNKESASLLNNLVVCSCGLGFVHRRKDTVSKYHYRYYSCKTYKHTHELEKCGNKIWRADKLEELIIDRVNNYESLNEKLKIEHAKKKELDSMMNDIDAQINYYEAQIEANEELK |
9 | 5u6zA | 0.21 | 0.11 | 3.39 | 0.87 | Neff-PPAS | | ---NAQTAFWKSLLKGPPPPPNCKHSEPCVLRTVKAGPNCGRQFYVCARPEGHSSNPRCNFFLWLT-------------------------------------------------------- |
10 | 3he5A | 0.16 | 0.06 | 1.92 | 0.55 | HHsearch | | ----------------------------------------------------------------------------SNLVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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