Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MLEPILVMAPIPLVLIFLYSYFKIKLHKLITIALFLGCLFFILRDFCFPPMLWTQLQNITLPFNNILGNKSFQVKCNN |
1 | 5ezmA | 0.05 | 0.05 | 2.38 | 0.81 | SPARKS-K | | AYAVWVAVAFVVMLLGIAVARLLLRRVLPSVAVYAMGMYLGFTVALLGHETVGRPASGADIAIAQKLTPEMPLYGVQM |
2 | 5c6gA1 | 0.20 | 0.15 | 4.94 | 0.51 | FFAS-3D | | -----MVMAQKNLVYRLSQQYLAAQYYTLVRQCV--HGLRYVKDGFQLTVEEDIQVT---LQLARVLLEET------- |
3 | 5c6gA1 | 0.15 | 0.12 | 3.87 | 0.22 | HHpred | | -----MVMAHQKNLVYRLSQQYLAAARDLALVRQCVHGLRYVKDGFQLTVEEDIVLLEETHEVE-------------- |
4 | 5nl2A4 | 0.12 | 0.10 | 3.60 | 0.84 | MUSTER | | ILRGVGKLAVINAFVISFKDFWAVLAARLAFVIVFQNLVMFMSDFVDW---ISQQIHKEKVLMVELFM---------- |
5 | 2gifA | 0.11 | 0.09 | 3.27 | 0.60 | CNFpred | | --ATLIPTIAVPVVLLGTFAVLAFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATR---------- |
6 | 2pffB | 0.21 | 0.19 | 6.13 | 0.53 | HHsearch-2 | | PDKDYLLSIPISCPLIGV-----IQLAHYVVTAKLLGFTPGELRSYLKQGLVTAVADSWESFFVSVRKAFFIGVRCYE |
7 | 5nl2A4 | 0.12 | 0.10 | 3.63 | 0.76 | Neff-PPAS | | ILRGVGKLAIINAFVISFKDFWAVLAARLAFVIVFQNLVMFMSDFVDWV-DISQQIHKEKVLMVELFM---------- |
8 | 5t4oI | 0.08 | 0.05 | 2.06 | 0.32 | HHsearch | | --------NLN---------------ATILGQAIAFVLFVLFAMKYVWPPLMA-AIEKRQKEIADGLASAEAHKDAT- |
9 | 4b4aA2 | 0.15 | 0.12 | 3.90 | 0.71 | SP3 | | -----------PIVLYVLQKAGVITPEQLASFRKYFIVIAFVIGAIIAPVSTQVLAIPLLLLYEISIFLGKL------ |
10 | 3b4qA | 0.17 | 0.17 | 5.50 | 0.44 | PROSPECTOR2 | | LNSAVVANAPAPVQAAVAGAQEYAAQAGLNTEELAVDALYNAIKVRGIPPQIEAFYQANRTNFNGFYANRGAIDFIFS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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