>PF05277 (336 residues) KKLKRYFMIGLAGLGGGAIIGLTGGLAAPFVAAGAGAIIGGAGAAALGSTAGIAVIGSLF GVAGAGLTGYKMKKRVGDIEEFAFDTLTKGRELHLTIAVSGWITEEGSHAFQKPWMSLMN SREQYCVRYESSYLLELGRAMDYFLSFAVSMAAQEALKYTILSGIISAIAWPATFLTFAS VIDNPWGVCIRRSAEVGKHLAEILISRQQGKRPVTLIGFSLGARVIFYCLQEMAQRKGCE GIVEDVVLLGAPIPGYVEQWKCFERVVCGKIVNGYCTGDWLLKFLYRTSTATLKIAGLGP VAWNNRRMINVDLSNIVSGHADYPNKMPSVLEAVGV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KKLKRYFMIGLAGLGGGAIIGLTGGLAAPFVAAGAGAIIGGAGAAALGSTAGIAVIGSLFGVAGAGLTGYKMKKRVGDIEEFAFDTLTKGRELHLTIAVSGWITEEGSHAFQKPWMSLMNSREQYCVRYESSYLLELGRAMDYFLSFAVSMAAQEALKYTILSGIISAIAWPATFLTFASVIDNPWGVCIRRSAEVGKHLAEILISRQQGKRPVTLIGFSLGARVIFYCLQEMAQRKGCEGIVEDVVLLGAPIPGYVEQWKCFERVVCGKIVNGYCTGDWLLKFLYRTSTATLKIAGLGPVAWNNRRMINVDLSNIVSGHADYPNKMPSVLEAVGV | |||||||||||||||||||
1 | 2pplA | 0.11 | 0.08 | 3.01 | 0.74 | SPARKS-K | ----------------------MKEVCYEDLGCFSDTEPWGGTAIRPLKILPWSPEKIGTRFLLYTNENPNNFQILLLSDPSTIEASNFQMDRKTRFIIHGFIDKGDESWVTDMCKKLFEVEECICVDW-------------------------------------------------KKGSQATYTQAANNVRVVGAQVAQMLDILLYPPSKVHLIGHSLGAHVAGEAGSKT-------PGLSRITGLDPVEASFES----TPEEVRADFVDVIHTDAAGFGTNQQMGHLDFFPNGGESMPNALSQIVDLDGIFVACNHLRSYKYYLESILNPDG | |||||||||||||
2 | 2h7yA | 0.14 | 0.10 | 3.35 | 0.87 | FFAS-3D | -------------------------------AGMFRALFRQAVEDDRYGEFLDVLAEAS----AFRPQFASPEACSERLDPVLLAGGTDAEGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLP-------------------------------------------------GYGTGGTALLPADLDTALDAQARAILRAA-GDAPVVLLGHSGGALLAHELAFRLERAHGAP--PAGIVLVDPYPPGHQEPIEVWSRQSSAPVLLVRASEP--------LGDWQEERGDWRAHWDLPHTVADVP-----GDHFAVAEAVLSWLDAIG- | |||||||||||||
3 | 4qnnA | 0.10 | 0.07 | 2.40 | 1.65 | HHpred | -------------------------------------------------------------------------ILTRENKHDFYLDEFKI-KHQVVFITHGFTSSADT-ENFLAMAKALGNYLVILIDWRVAACTE----------------------------------EMSGI----QLAY--YSYAASNTRLVGNYIATVTKMLNVPMANIRLIGHSLGAHTSGFAGKKVQELG--LGKYSEIIGLDPAGPSFKSCSERICK-TDAHYVQIIHTSN-HLGTLVTLGTVDF-MNNGY-NQ---PGCGLPLI-GETCSHTRVKYFTECIKHECCL | |||||||||||||
4 | 4b90A | 0.08 | 0.07 | 2.79 | 0.72 | MUSTER | TCVDDFYHGTKAALVGGT----TMIIGHVLPDKETSLVDAYEKCRGLADPKVCCDYALHVGITWWAPKVKAEMETL----------VREKGVNSFQMFMTY-LYMLRDSELYQVLHACKDIGAIARVHAEN------GELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGK----VVLAETT------TAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLADTLN--------IVASDHRPFTTKQKAMGKEDFTKIPHG--------VSGVQDRMSVIWERGVVGGKM | |||||||||||||
5 | 5t0oA | 0.13 | 0.11 | 3.85 | 0.84 | CNFpred | KEVVKTFVEALILVIIVMYMFLKTLIPMIAVPVSLLGTFAGLSINLLTLFALILAIGIVV--DDAIIVVENIDRILHENEQISV-----------------------KDAAIQAMQEVS-----SPVISIVLVLCAVFVPV-GFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLR-VKKFNDFFDWSTSVFSAGVAYILKRTI-EDQGLMISIINL-LHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSS-----LKENAAAMFIGLQ-ADQIIAELNKKF-ASSVFIGLPPIPGLSGGFEMYVQNKSGKSYDEIQKDVNKLVAAANQ | |||||||||||||
6 | 4qnnA | 0.11 | 0.07 | 2.47 | 1.38 | HHsearch-2 | --------------------------------------------------------------------------PCPSDDTVKMIILTRI-KHQVVFITHGFTSSADT-ENFLAMAKALGNYLVILIDWRVAACTEE------------------------------MSGIQ--L------A--YYSYAASNTRLVGNYIATVTKMLNVPMANIRLIGHSLGAHTSGFAGKKVQELG--LGKYSEIIGLDPAGPSFKSCSERICK-TDAHYVQIIHTSN-HLGTLVTLGTVDF-MNNGY-NQ---PGCGLPLI-GETCSHTRVKYFTECIKHECCL | |||||||||||||
7 | 2veoA | 0.09 | 0.08 | 3.15 | 0.69 | Neff-PPAS | -----APSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGIRALKNYQNLPSDSKVALEGYAPELNIVGASHGGTPV------SAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQQTLKQIRGRGFCLPQVVLTYPLNVFSLVNDTNLLNEAPIAGILKQETVVQAEASYTKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPI----------------AEHLTAEIFGLVPSLWFIKQAFDGTTPKVICGTPIPAI------AGITTPSADQVLGSDLANQLRSLNG | |||||||||||||
8 | 4qnnA | 0.11 | 0.07 | 2.59 | 1.71 | HHsearch | ----------------------------------------------------------PC-PYSDD--TVKMIILTRENKHDFYLDEFKI-KHQVVFITHGFTSSADT-ENFLAMAKALGNYLVILIDWRVAACTE----------------------------------EMSGI----QLAY--YSYAASNTRLVGNYIATVTKMLNVPMANIRLIGHSLGAHTSGFAGKKVQELG--LGKYSEIIGLDPAGPSFKSCSERICK-TDAHYVQIIHTSN-HLGTLVTLGTVDF-MNNGY-NQ---PGCGLPLI-GETCSHTRVKYFTECIKHECC- | |||||||||||||
9 | 1mn6a | 0.14 | 0.10 | 3.43 | 1.04 | PROSPECTOR2 | A--------------GMFRALFRQAVEDDRYGEFLDVLAEASA-------------------FRPQFASPEACSERLDPVLLAGGPTDRAEGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPADLDTALDA--------------------------------------------------------------QARAILRA-AGDAPVVLLGHSGGALLAHELAFRLERAHG--APPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMLAMGRYARFLAGDWQEERGDWRAHWDLPHTVADVPG---DHFTMMRDAEAVLSWLDA | |||||||||||||
10 | 1ethA | 0.15 | 0.08 | 2.72 | 1.55 | SAM | -----------------------------------------------------------------------------------------RMDRKTRFIIHGFIDKGE-EDWLSNICKNLESVNCICVDWKGGS-------------------------------------------------RTGYTQASQNIRIVGAEVAYFVEVLGYSPSNVHVIGHSLGSHAAGEAGRRTN-------TIERITGLDPAEPCFQGELVRLDP-SDAKFVDVIHTDAAPFGMSQTVGHLDFFPNGGK-QM---PGCQKNILDFVACNHLRYKYYADSILNPDGF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |